RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PPIEQ9UNP9 301 aaKnown RBP18.92■□□□□ 0.62
TRIM4-202ENST00000354241 SPAARA0A1B0GVQ0 90 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 SERINC4A6NH21 518 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 BCKDKO14874 412 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 UGT2B11O75310 529 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 OR5F1O95221 314 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 CDK4P11802 303 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 HTR2AP28223 471 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 TIPARPQ7Z3E1 657 aaKnown RBP18.91■□□□□ 0.62
TRIM4-202ENST00000354241 GDF7Q7Z4P5 450 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 SLC34A3Q8N130 599 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 C17orf47Q8NEP4 570 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 THAP3Q8WTV1 239 aaPredicted RBP18.91■□□□□ 0.62
TRIM4-202ENST00000354241 SLC38A4Q969I6 547 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 OMA1Q96E52 524 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 EVA1AQ9H8M9 152 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 FOXJ2Q9P0K8 574 aa18.91■□□□□ 0.62
TRIM4-202ENST00000354241 SCDO00767 359 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 SLC16A6O15403 523 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 CSTAP01040 98 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 NPRL3Q12980 569 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 OR1Q1Q15612 314 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 ZSWIM7Q19AV6 140 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 DESI1Q6ICB0 168 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 GRAMD2AQ8IUY3 354 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 CMIPQ8IY22 773 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 C8orf59Q8N0T1 100 aaPredicted RBP18.9■□□□□ 0.62
TRIM4-202ENST00000354241 OR4K5Q8NGD3 323 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 GRIP2Q9C0E4 1043 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 SLC7A7Q9UM01 511 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 MGAT4BQ9UQ53 548 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 PCDHGA3Q9Y5H0 932 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 THY1P04216 161 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 FTH1P19P0C7X4 201 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 ABCD3P28288 659 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 CLK3P49761 638 aaKnown RBP18.9■□□□□ 0.62
TRIM4-202ENST00000354241 UGT2B15P54855 530 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 NDUFAF6Q330K2 333 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 KLHL26Q53HC5 615 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 TMEM154Q6P9G4 183 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 GATSQ8NAP1 163 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 CT55Q8WUE5 264 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 ZNF559Q9BR84 538 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 GABARAPL3Q9BY60 117 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 ANKRD19PQ9H560 264 aa18.9■□□□□ 0.62
TRIM4-202ENST00000354241 LOC102723996A0A087X1L8 192 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 TSPAN2O60636 221 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 ICOSLGO75144 302 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 TNFAIP8O95379 198 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 ADAP00813 363 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 TCN2P20062 427 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 EPHA2P29317 976 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 NRG3P56975 720 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 TARDBPQ13148 414 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRIM4-202ENST00000354241 PCOLCEQ15113 449 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 PGBD2Q6P3X8 592 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 TTC33Q6PID6 262 aaPredicted RBP18.89■□□□□ 0.61
TRIM4-202ENST00000354241 C16orf47Q6ZP98 133 aaPredicted RBP18.89■□□□□ 0.61
TRIM4-202ENST00000354241 NKAIN4Q8IVV8 208 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 LINC00471Q8N535 108 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 RNF217Q8TC41 542 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 TP53INP1Q96A56 240 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 POLR2J2Q9GZM3 115 aaKnown RBP18.89■□□□□ 0.61
TRIM4-202ENST00000354241 POLR2J3Q9H1A7 115 aaKnown RBP18.89■□□□□ 0.61
TRIM4-202ENST00000354241 SCOCQ9UIL1 159 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 GMPPBQ9Y5P6 360 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 SDK2Q58EX2 2172 aa18.89■□□□□ 0.61
TRIM4-202ENST00000354241 A0A087WUU8 490 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 TRAPPC13A5PLN9 417 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 FMO6PO60774 539 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 NTN1O95631 604 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 CD63P08962 238 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 LSM11P83369 360 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF691Q5VV52 312 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 KLHL17Q6TDP4 642 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF730Q6ZMV8 503 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF550Q7Z398 422 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF786Q8N393 782 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 NUBPLQ8TB37 319 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 ING2Q9H160 280 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 TMEM27Q9HBJ8 222 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 SLC35A3Q9Y2D2 325 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 EP300Q09472 2414 aaPredicted RBP18.88■□□□□ 0.61
TRIM4-202ENST00000354241 IGHV1-45A0A0A0MS14 117 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 TBXA2RP21731 343 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 LCN1P31025 176 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 RPS18P62269 152 aaKnown RBP18.88■□□□□ 0.61
TRIM4-202ENST00000354241 RAPSNQ13702 412 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 KEAP1Q14145 624 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 BTBD16Q32M84 506 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 RRM2BQ7LG56 351 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 THAP5Q7Z6K1 395 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 OR5L2Q8NGL0 311 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 PHOSPHO1Q8TCT1 267 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 OIT3Q8WWZ8 545 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 UCK2Q9BZX2 261 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 SPRY4Q9C004 299 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 HS3ST3B1Q9Y662 390 aa18.88■□□□□ 0.61
TRIM4-202ENST00000354241 WWP2O00308 870 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 ADAM11O75078 769 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms