RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 IL21RQ9HBE5 538 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 NEUROD4Q9HD90 331 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 RPRD1BQ9NQG5 326 aaKnown RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 STARD5Q9NSY2 213 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 MALT1Q9UDY8 824 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CACNA1HO95180 2353 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 A0A0A6YYD5 115 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 GLOD5A6NK44 160 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FAM25AB3EWG3 89 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FAM25CB3EWG5 89 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FAM25GB3EWG6 89 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 PATE3B3GLJ2 98 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 TNFRSF10AO00220 468 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CLEC3AO75596 197 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SLC2A2P11168 524 aaPredicted RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 PSKH1P11801 424 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ST6GAL1P15907 406 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ALAS2P22557 587 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CPN2P22792 545 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 HLA-DMAP28067 261 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CCT3P49368 545 aaKnown RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 AFF3P51826 1226 aaKnown RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 GPLD1P80108 840 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CFHR1Q03591 330 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FAPQ12884 760 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 TPBGQ13641 420 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 QPRTQ15274 297 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ELOCQ15369 112 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 GPR19Q15760 415 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 PMS2CLQ68D20 193 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 OR4C11Q6IEV9 310 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 PLET1Q6UQ28 207 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 LYPD8Q6UX82 237 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CD300LDQ6UXZ3 194 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 QSOX2Q6ZRP7 698 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 KIF18BQ86Y91 864 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 C1orf210Q8IVY1 113 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 Q8N402 240 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 MFSD9Q8NBP5 474 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 MORN4Q8NDC4 146 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 OR6T1Q8NGN1 323 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 GRPEL2Q8TAA5 225 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 XAGE5Q8WWM1 108 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 RASSF5Q8WWW0 418 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SLC9A6Q92581 669 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 KIAA1143Q96AT1 154 aaPredicted RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 EXOSC8Q96B26 276 aaKnown RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 TM4SF19Q96DZ7 209 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 OTUB1Q96FW1 271 aaPredicted RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 PPP1R3EQ9H7J1 279 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 DDX31Q9H8H2 851 aaKnown RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 FER1L5A0AVI2 2057 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 A0A0G2JMP0 313 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 TMEM129A0AVI4 362 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 OR5K3A6NET4 321 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 LMO7DNF2Z398 122 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SLC30A4O14863 429 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ERI3O43414 337 aaKnown RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 HPGDSO60760 199 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CPNE3O75131 537 aaKnown RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 LALBAP00709 142 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 HLA-DQB1P01920 261 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CCNYL3P0C7X3 344 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 LIMS3P0CW19 117 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 LIMS4P0CW20 117 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ACP2P11117 423 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SOX18P35713 384 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FRKP42685 505 aaPredicted RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 MAP2K3P46734 347 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FASLGP48023 281 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SMIM11AP58511 58 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 GNG2P59768 71 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 DUSP2Q05923 314 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 RAB40BQ12829 278 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 DEFB110Q30KQ9 67 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF750Q32MQ0 723 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 KLHL22Q53GT1 634 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 TJAP1Q5JTD0 557 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 LCN1P1Q5VSP4 162 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 C1orf94Q6P1W5 598 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ABHD17CQ6PCB6 329 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CNIH2Q6PI25 160 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 OGFOD3Q6PK18 319 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SZRD1Q7Z422 152 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 TCTE3Q8IZS6 198 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FAM174AQ8TBP5 190 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 AP3S1Q92572 193 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 RNFT2Q96EX2 444 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SOSTQ9BQB4 213 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 FNDC11Q9BVV2 318 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 B3GAT2Q9NPZ5 323 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 GIMAP4Q9NUV9 329 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 MRPS18AQ9NVS2 196 aaKnown RBP8□□□□□ -1.13
TRIM55-204ENST00000353317 AHSPQ9NZD4 102 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ATG4BQ9Y4P1 393 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 ALG5Q9Y673 324 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 CLCA3PQ9Y6N3 262 aa8□□□□□ -1.13
TRIM55-204ENST00000353317 SHISA3A0PJX4 238 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 OR5K4A6NMS3 321 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms