RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 KRCC1Q9NPI7 259 aaPredicted RBP17.1■□□□□ 0.33
TRIM41-202ENST00000351937 CFL2Q9Y281 166 aa17.1■□□□□ 0.33
TRIM41-202ENST00000351937 ADAMTS20P59510 1910 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 MUC3AQ02505 3323 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 NPIPB9F8W1W9 429 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 M0R129 80 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 NOL3O60936 208 aaKnown RBP17.09■□□□□ 0.33
TRIM41-202ENST00000351937 CCNA2P20248 432 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 ATP12AP54707 1039 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRIM41-202ENST00000351937 TBC1D15Q8TC07 691 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 RORBQ92753 470 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 GGHQ92820 318 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 SLC35B4Q969S0 331 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 ZNF559Q9BR84 538 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 SLC7A5P2Q9GIP4 190 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 CKMT1AP12532 417 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 FPR3P25089 353 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 GIPRP48546 466 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 PLAURQ03405 335 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 RASSF6Q6ZTQ3 369 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 OR8J1Q8NGP2 316 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 OR2I1PQ8NGU4 316 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 TMEM255BQ8WV15 326 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 Q96MT0 163 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 PLGRKTQ9HBL7 147 aa17.09■□□□□ 0.33
TRIM41-202ENST00000351937 INMTO95050 263 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 SYPP08247 313 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 RORAP35398 523 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 CDK5Q00535 292 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 NSDHLQ15738 373 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 CLPPQ16740 277 aaPredicted RBP17.08■□□□□ 0.33
TRIM41-202ENST00000351937 CMIPQ8IY22 773 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 RNF113BQ8IZP6 322 aaKnown RBP17.08■□□□□ 0.33
TRIM41-202ENST00000351937 ZNF614Q8N883 585 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 FAM46AQ96IP4 442 aaKnown RBP17.08■□□□□ 0.33
TRIM41-202ENST00000351937 PRSS27Q9BQR3 290 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 AMBNQ9NP70 447 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 ACOT13Q9NPJ3 140 aa17.08■□□□□ 0.33
TRIM41-202ENST00000351937 SYNDIG1LA6NDD5 238 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 BCAS1O75363 584 aaPredicted RBP17.08■□□□□ 0.32
TRIM41-202ENST00000351937 IGKV3-11P04433 115 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 STAT5AP42229 794 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 PPICP45877 212 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 RNF144AP50876 292 aaPredicted RBP17.08■□□□□ 0.32
TRIM41-202ENST00000351937 FGFBP1Q14512 234 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 GINS1Q14691 196 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 NNATQ16517 81 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 ZNF613Q6PF04 617 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 KIF18BQ86Y91 864 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 NRMQ8IXM6 262 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 IFI44Q8TCB0 444 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 CNOT9Q92600 299 aaKnown RBP17.08■□□□□ 0.32
TRIM41-202ENST00000351937 OR6C1Q96RD1 312 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 TGIF2Q9GZN2 237 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 TMEM27Q9HBJ8 222 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 CNIH4Q9P003 139 aa17.08■□□□□ 0.32
TRIM41-202ENST00000351937 A8MUA0 341 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 POLR1CO15160 346 aaPredicted RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 NTN1O95631 604 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 CDK1P06493 297 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 MAP2K4P45985 399 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 MASP1P48740 699 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 SMSP52788 366 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 NUDT6P53370 316 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 GP2P55259 537 aaKnown RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 TMEM201Q5SNT2 666 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 ZSCAN1Q8NBB4 408 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 SLC2A12Q8TD20 617 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 CCDC74BQ96LY2 380 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 IL4I1Q96RQ9 567 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 OR8D2Q9GZM6 311 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 SLC25A19Q9HC21 320 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 DNAJB12Q9NXW2 375 aaKnown RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 WARS2Q9UGM6 360 aaKnown RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 KLF4O43474 513 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 FADS2O95864 444 aaKnown RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 DDAH2O95865 285 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 NR4A1P22736 598 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 DUSP3P51452 185 aaPredicted RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 EFNA3P52797 238 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 SYT6Q5T7P8 510 aaPredicted RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 ZBTB46Q86UZ6 589 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 ZNF321PQ8N8H1 164 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 OR14A16Q8NHC5 309 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 TEX47Q8TBZ9 253 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 ZNF721Q8TF20 911 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 RAB2BQ8WUD1 216 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 OIT3Q8WWZ8 545 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 DAZLQ92904 295 aaKnown RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 CLIP3Q96DZ5 547 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 HSPBAP1Q96EW2 488 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 ART5Q96L15 291 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 FUNDC2Q9BWH2 189 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 POLDIP3Q9BY77 421 aaKnown RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 VN1R1Q9GZP7 353 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 SYNDIG1Q9H7V2 258 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 GPR83Q9NYM4 423 aa17.07■□□□□ 0.32
TRIM41-202ENST00000351937 CNOT2Q9NZN8 540 aaKnown RBP17.07■□□□□ 0.32
TRIM41-202ENST00000351937 RARRES3Q9UL19 164 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms