RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 VASNQ6EMK4 673 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 ZNF322Q6U7Q0 402 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-201ENST00000351487 KIAA1324Q6UXG2 1013 aaKnown RBP20.55■□□□□ 0.88
UPF3A-201ENST00000351487 SIRT6Q8N6T7 355 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 TMEM52Q8NDY8 209 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 TMEM239Q8WW34 195 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 SPRYD4Q8WW59 207 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-201ENST00000351487 POT1Q9NUX5 634 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 MAT2BQ9NZL9 334 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 POU2F3Q9UKI9 436 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 RFXAPO00287 272 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 BHLHE40O14503 412 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 CSF3P09919 207 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 LSSP48449 732 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 PPP3R1P63098 170 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 NIPAL3Q6P499 406 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 ZNF517Q6ZMY9 492 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-201ENST00000351487 ZNF655Q8N720 491 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-201ENST00000351487 OR52L1Q8NGH7 329 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 DNAJA4Q8WW22 397 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-201ENST00000351487 CD180Q99467 661 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 DPH1Q9BZG8 443 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 CLEC1BQ9P126 229 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 PEX12O00623 359 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 CASKO14936 926 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 CELP19835 753 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 NT5EP21589 574 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 TBXA2RP21731 343 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 MGAT2Q10469 447 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 ILF3Q12906 894 aaKnown RBP eCLIP20.54■□□□□ 0.88
UPF3A-201ENST00000351487 RPL13AP3Q6NVV1 102 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 TMEFF1Q8IYR6 380 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 LNX2Q8N448 690 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 HS6ST2Q96MM7 605 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 DCLRE1CQ96SD1 692 aaKnown RBP20.54■□□□□ 0.88
UPF3A-201ENST00000351487 CTRCQ99895 268 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 FBXO34Q9NWN3 711 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 GABRPO00591 440 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 GKN3PP0CG01 181 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 PVRP15151 417 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 MAKP20794 623 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 PTNP21246 168 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 AKT2P31751 481 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 ATP6V1E1P36543 226 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 MAGEA10P43363 369 aaPredicted RBP20.54■□□□□ 0.88
UPF3A-201ENST00000351487 TPMTP51580 245 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 MRPS21P82921 87 aaKnown RBP20.54■□□□□ 0.88
UPF3A-201ENST00000351487 SHC2P98077 582 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 HTR4Q13639 388 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 EOGTQ5NDL2 527 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 RAB43Q86YS6 212 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 CAMKK1Q8N5S9 505 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 CTHRC1Q96CG8 243 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 TMED9Q9BVK6 235 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 MOV10Q9HCE1 1003 aaKnown RBP20.54■□□□□ 0.88
UPF3A-201ENST00000351487 POLE3Q9NRF9 147 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 C20orf141Q9NUB4 165 aa20.54■□□□□ 0.88
UPF3A-201ENST00000351487 FAM183AA6NL82 134 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 BRINP1O60477 761 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 GALR3O60755 368 aaPredicted RBP20.53■□□□□ 0.88
UPF3A-201ENST00000351487 TMCC2O75069 709 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 CCNKO75909 580 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 PDZK1Q5T2W1 519 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 PFN4Q8NHR9 129 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 HOXB13Q92826 284 aaPredicted RBP20.53■□□□□ 0.88
UPF3A-201ENST00000351487 SLC22A4Q9H015 551 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 CPNE7Q9UBL6 633 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 TMEM5Q9Y2B1 443 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 A0A0J9YY10 115 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 SMIM30A4D0T7 59 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 IFI30P13284 250 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 LBX1P52954 281 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 UBE2IP63279 158 aaKnown RBP20.53■□□□□ 0.88
UPF3A-201ENST00000351487 PLBD1Q6P4A8 553 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 TMPRSS11FQ6ZWK6 438 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 MARCH9Q86YJ5 346 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 SHISA5Q8N114 240 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 CA13Q8N1Q1 262 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 OR5T3Q8NGG3 340 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 OR6F1Q8NGZ6 308 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 NEIL3Q8TAT5 605 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 GPBAR1Q8TDU6 330 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 DOK4Q8TEW6 326 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 PATE1Q8WXA2 126 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 SOSTQ9BQB4 213 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 EVA1AQ9H8M9 152 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 TBC1D17Q9HA65 648 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 CLDND1Q9NY35 253 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 FBXL21Q9UKT6 434 aa20.53■□□□□ 0.88
UPF3A-201ENST00000351487 NPIPA5A0A0B4J1W7 369 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 HTR3EA5X5Y0 456 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 NPIPA7E9PJI5 369 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 NPIPA8P0DM63 369 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 BMP7P18075 431 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 DRD1P21728 446 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 PAICSP22234 425 aaKnown RBP20.52■□□□□ 0.88
UPF3A-201ENST00000351487 CFL1P23528 166 aaKnown RBP20.52■□□□□ 0.88
UPF3A-201ENST00000351487 PLAURQ03405 335 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 GARNL3Q5VVW2 1013 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 MEPCEQ7L2J0 689 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms