RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 DGCR6LQ9BY27 220 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 DNAJB12Q9NXW2 375 aaKnown RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 SLC35A3Q9Y2D2 325 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 GMPPBQ9Y5P6 360 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 TRAPPC13A5PLN9 417 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 SCDO00767 359 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 PLD2O14939 933 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 PRKNO60260 465 aaPredicted RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 GKN3PP0CG01 181 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 TGM1P22735 817 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 NBL1P41271 181 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 RNF144AP50876 292 aaPredicted RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 PGBD2Q6P3X8 592 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 DHRS13Q6UX07 377 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 GDF7Q7Z4P5 450 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 SLCO6A1Q86UG4 719 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 APCDD1LQ8NCL9 501 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 OR4K5Q8NGD3 323 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 CNOT9Q92600 299 aaKnown RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 PITX2Q99697 317 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 WDR77Q9BQA1 342 aaPredicted RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 UCK2Q9BZX2 261 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 PTRH2Q9Y3E5 179 aaKnown RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 HSPE1-MOB4S4R3N1 261 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 H3BNH8 94 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 REM1O75628 298 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 UTS2O95399 124 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 CSTAP01040 98 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 POU2F1P14859 743 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 RYKP34925 604 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 CLK3P49761 638 aaKnown RBP17.2■□□□□ 0.34
PTN-201ENST00000348225 NRG3P56975 720 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 OR1Q1Q15612 314 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 KLHL26Q53HC5 615 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 HES3Q5TGS1 186 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 TMEM164Q5U3C3 297 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 C6orf15Q6UXA7 325 aaPredicted RBP17.2■□□□□ 0.34
PTN-201ENST00000348225 ZNF730Q6ZMV8 503 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 RRM2BQ7LG56 351 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 ZNF440Q8IYI8 595 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 OR2Y1Q8NGV0 311 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 OR4C3Q8NH37 302 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 OR8K3Q8NH51 312 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 NUBPLQ8TB37 319 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 ACOT11Q8WXI4 607 aaPredicted RBP17.2■□□□□ 0.34
PTN-201ENST00000348225 YTHDF1Q9BYJ9 559 aaKnown RBP17.2■□□□□ 0.34
PTN-201ENST00000348225 NRSN2Q9GZP1 204 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 TMEM27Q9HBJ8 222 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 KRCC1Q9NPI7 259 aaPredicted RBP17.2■□□□□ 0.34
PTN-201ENST00000348225 FAM86C1Q9NVL1 165 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 PADI1Q9ULC6 663 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 NDRG4Q9ULP0 352 aaKnown RBP17.2■□□□□ 0.34
PTN-201ENST00000348225 NTNG1Q9Y2I2 539 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 PCDHGA3Q9Y5H0 932 aa17.2■□□□□ 0.34
PTN-201ENST00000348225 LOC102723996A0A087X1L8 192 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 TEX51A0A1B0GUA7 166 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 ABCB7O75027 752 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 PRG2P13727 222 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 ADH7P40394 386 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 FOLR3P41439 243 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 CLDN6P56747 220 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 SLC26A5P58743 744 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 ESRRGP62508 458 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 RPP38P78345 283 aaKnown RBP17.19■□□□□ 0.34
PTN-201ENST00000348225 PLAURQ03405 335 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 TARDBPQ13148 414 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTN-201ENST00000348225 KCTD21Q4G0X4 260 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 ZNF613Q6PF04 617 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 KLHL17Q6TDP4 642 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 ISLR2Q6UXK2 745 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 PRR22Q8IZ63 422 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 OR5L2Q8NGL0 311 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 WDR36Q8NI36 951 aaKnown RBP17.19■□□□□ 0.34
PTN-201ENST00000348225 C8orf44Q96CB5 159 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 OMA1Q96E52 524 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 ADOQ96SZ5 270 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 TRIM2Q9C040 744 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 ZNF223Q9UK11 482 aaPredicted RBP17.19■□□□□ 0.34
PTN-201ENST00000348225 SLC7A7Q9UM01 511 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 OTOGLQ3ZCN5 2332 aa17.19■□□□□ 0.34
PTN-201ENST00000348225 A0A087WUU8 490 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 TRBV11-1A0A0K0K1C0 115 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 CDC14CA4D256 554 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 TSPAN2O60636 221 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 BCAS1O75363 584 aaPredicted RBP17.18■□□□□ 0.34
PTN-201ENST00000348225 IGHEP01854 428 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 TBXA2RP21731 343 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 HTR2AP28223 471 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 ABCD3P28288 659 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 PNLIPRP2P54317 469 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 NUP107P57740 925 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 IL5RAQ01344 420 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 COX10Q12887 443 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 RAPSNQ13702 412 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 C1orf94Q6P1W5 598 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 PIGXQ8TBF5 258 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 HRASLS5Q96KN8 279 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 POLR1BQ9H9Y6 1135 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 E9PQ18 207 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 KLF7O75840 302 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms