RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 NANOGP8Q6NSW7 305 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ARHGAP11AQ6P4F7 1023 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 HACD2Q6Y1H2 254 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 SERPINA11Q86U17 422 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 TMEM251Q8N6I4 163 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 C11orf65Q8NCR3 313 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 GALNT11Q8NCW6 608 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ST6GALNAC3Q8NDV1 305 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 PHOSPHO1Q8TCT1 267 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 RNF138Q8WVD3 245 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ZNF607Q96SK3 696 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 TREX2Q9BQ50 279 aaPredicted RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 CPPED1Q9BRF8 314 aaPredicted RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 SPATA5L1Q9BVQ7 753 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 DEFB127Q9H1M4 99 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 TMEM38AQ9H6F2 299 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ZDHHC11Q9H8X9 412 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 NANOGQ9H9S0 305 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ACKR4Q9NPB9 350 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 FBXO34Q9NWN3 711 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 NDE1Q9NXR1 346 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 SUCOQ9UBS9 1254 aaKnown RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 TAGLN3Q9UI15 199 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 DKKL1Q9UK85 242 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 SLC35A3Q9Y2D2 325 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 IFT52Q9Y366 437 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 DNAJC13O75165 2243 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 BSNQ9UPA5 3926 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ZGRF1Q86YA3 2104 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 EML6Q6ZMW3 1958 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ANKUB1A6NFN9 424 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 SERINC4A6NH21 518 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 LRRC3CA6NJW4 275 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 NPIPB9F8W1W9 429 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 HCRTR2O43614 444 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 KIAA0513O60268 411 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 SUSD5O60279 629 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 CDC40O60508 579 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNCA-202ENST00000345009 EIF4E2O60573 245 aaKnown RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 HCN1O60741 890 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 TNFRSF21O75509 655 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 PDE9AO76083 593 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 BCHEP06276 602 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ESRRAP11474 423 aaPredicted RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 MAGEA5P43359 124 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 NUDT2P50583 147 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ZNF41P51814 821 aaPredicted RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 GAS1P54826 345 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 DSCR4P56555 118 aaPredicted RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 MTPNP58546 118 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 CDK6Q00534 326 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 CHRNEQ04844 493 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 CAPRIN1Q14444 709 aaKnown RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 KRT72Q14CN4 511 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 RNFT1Q5M7Z0 435 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 INTS11Q5TA45 600 aaKnown RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 OR5M10Q6IEU7 315 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 GFRALQ6UXV0 394 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 FRRS1Q6ZNA5 592 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ZAR1Q86SH2 424 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 TREML1Q86YW5 311 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 SIAH3Q8IW03 269 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 CMIPQ8IY22 773 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ANKFN1Q8N957 763 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 WDSUB1Q8N9V3 476 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 BBS10Q8TAM1 723 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 MIB2Q96AX9 1013 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 NTNG2Q96CW9 530 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 TMEM19Q96HH6 336 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 DSN1Q9H410 356 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ZNF703Q9H7S9 590 aaPredicted RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 KAT8Q9H7Z6 458 aaKnown RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 BCL2L10Q9HD36 194 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 FLRT3Q9NZU0 649 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 STOML1Q9UBI4 398 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 ANGPT4Q9Y264 503 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 NTNG1Q9Y2I2 539 aa10.79□□□□□ -0.68
SNCA-202ENST00000345009 MRPS18CQ9Y3D5 142 aaKnown RBP10.79□□□□□ -0.68
SNCA-202ENST00000345009 EXPH5Q8NEV8 1989 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 A0A087WZY1 265 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 IGLV3-32A0A0A0MS00 114 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 TRGV5A0A0B4J1U4 118 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 OR14I1A6ND48 311 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 PRORSD1PA6NEY8 169 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 AGAP5A6NIR3 686 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 LINC01387J3KSC0 135 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 ZNF264O43296 627 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 UGT2B17O75795 530 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 PGM3O95394 542 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 NUDT14O95848 222 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 CSTAP01040 98 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 HPNP05981 417 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 CHRM4P08173 479 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 RFPL3SP0C7P2 107 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 ARAFP10398 606 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 UBL4AP11441 157 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 UQCRBP14927 111 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 ETS2P15036 469 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 MST1P26927 711 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms