RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SOAT1P35610 550 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 DGKQP52824 942 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 CLDN20P56880 219 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 CASP8Q14790 479 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 DCST2Q5T1A1 773 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 OGFOD2Q6N063 350 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 ANKRD46Q86W74 232 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 LRRC34Q8IZ02 419 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 KIRREL3Q8IZU9 778 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 GCNT2Q8N0V5 402 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 ADAMTS15Q8TE58 950 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 RNASE6Q93091 150 aaKnown RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 ARL8AQ96BM9 186 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 MOAP1Q96BY2 351 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 INTS12Q96CB8 462 aaKnown RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 SH3YL1Q96HL8 342 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 GPATCH1Q9BRR8 931 aaKnown RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 LIME1Q9H400 295 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 THAP1Q9NVV9 213 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF469Q96JG9 3925 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 GOLGA8QA0A0J9YX86 632 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 A0A1W2PQD3 144 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 FAM221AA4D161 298 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 GOLGA8OA6NCC3 632 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 NPIPB9F8W1W9 429 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 GOLGA8NF8WBI6 632 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 H3BML4 177 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 SEC14L5O43304 696 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 IL18BPO95998 194 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 C1QCP02747 245 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 KITP10721 976 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 EPHA3P29320 983 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 IL12AP29459 219 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 OPRM1P35372 400 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 KIR2DL3P43628 341 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 CASP9P55211 416 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 NME5P56597 212 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 OCRLQ01968 901 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 GLYR1Q49A26 553 aaPredicted RBP13□□□□□ -0.33
HMGN3-202ENST00000344726 SPANXN4Q5MJ08 99 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 OLIG3Q7RTU3 272 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 C6orf120Q7Z4R8 191 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 GRAMD2AQ8IUY3 354 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 WDR75Q8IWA0 830 aaKnown RBP13□□□□□ -0.33
HMGN3-202ENST00000344726 FIG4Q92562 907 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 TESCQ96BS2 214 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 TM9SF2Q99805 663 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 PIGQQ9BRB3 760 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 AIG1Q9NVV5 245 aa13□□□□□ -0.33
HMGN3-202ENST00000344726 FAF1Q9UNN5 650 aaPredicted RBP13□□□□□ -0.33
HMGN3-202ENST00000344726 FREM1Q5H8C1 2179 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 RNF103-CHMP3A0A140T963 221 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 C9JVG2 144 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 SCDO00767 359 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 HDAC3O15379 428 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
HMGN3-202ENST00000344726 TNFSF13O75888 250 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 CPSF4O95639 269 aaKnown RBP12.99□□□□□ -0.33
HMGN3-202ENST00000344726 KRT16P08779 473 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 MATN1P21941 496 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 PSMA4P25789 261 aaKnown RBP12.99□□□□□ -0.33
HMGN3-202ENST00000344726 DNAJA1P31689 397 aaKnown RBP12.99□□□□□ -0.33
HMGN3-202ENST00000344726 UFM1P61960 85 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF117Q03924 483 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 PLPPR5Q32ZL2 321 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 FAM174BQ3ZCQ3 159 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 FLYWCH1Q4VC44 716 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 CBLN3Q6UW01 205 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 MAVSQ7Z434 540 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 GGNQ86UU5 652 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 MEIOBQ8N635 442 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 OR4A15Q8NGL6 344 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 GOT1L1Q8NHS2 421 aaPredicted RBP12.99□□□□□ -0.33
HMGN3-202ENST00000344726 RAB3IL1Q8TBN0 382 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 POC1BQ8TC44 478 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 SMPDL3BQ92485 455 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF524Q96C55 264 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF845Q96IR2 970 aaPredicted RBP12.99□□□□□ -0.33
HMGN3-202ENST00000344726 ZFP3Q96NJ6 502 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 SDF2Q99470 211 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 SFXN3Q9BWM7 321 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 MANSC1Q9H8J5 431 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 MED17Q9NVC6 651 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 NKIRAS1Q9NYS0 192 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 VPS13CQ709C8 3753 aa12.99□□□□□ -0.33
HMGN3-202ENST00000344726 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 PRSS51A0A1B0GVH4 220 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 A0A1W2PNV4 684 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 E9PBE3 544 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 LINC01387J3KSC0 135 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF195O14628 629 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 HPGDP15428 266 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF17P17021 662 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 ATP6V1C1P21283 382 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms