RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 RARRES3Q9UL19 164 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 ZNF443Q9Y2A4 671 aaPredicted RBP18.87■□□□□ 0.61
SOX12-201ENST00000342665 SLC35A3Q9Y2D2 325 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 GLP1RP43220 463 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 MCCD1P59942 119 aaPredicted RBP18.87■□□□□ 0.61
SOX12-201ENST00000342665 REEP5Q00765 189 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 DEFA5Q01523 94 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 OCLNQ16625 522 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 KDM4DQ6B0I6 523 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 SFRP4Q6FHJ7 346 aaPredicted RBP18.87■□□□□ 0.61
SOX12-201ENST00000342665 ERVK-19Q9WJR5 959 aa18.87■□□□□ 0.61
SOX12-201ENST00000342665 HMGB3O15347 200 aaKnown RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 PLGLB1Q02325 96 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 EXOSC7Q15024 291 aaKnown RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 ACSM3Q53FZ2 586 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 FOXRED2Q8IWF2 684 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 SLC22A8Q8TCC7 542 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 SPPL3Q8TCT6 385 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 KCMF1Q9P0J7 381 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 PPT2Q9UMR5 302 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 TEX13CA0A0J9YWL9 993 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 C17orf105B2RV13 164 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 SMAD9O15198 467 aaKnown RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 GABARAPO95166 117 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 NR0B1P51843 470 aaKnown RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 GRK1Q15835 563 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 SYT6Q5T7P8 510 aaPredicted RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 LIMS2Q7Z4I7 341 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 PARP16Q8N5Y8 322 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 OR52R1Q8NGF1 315 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 NUDT8Q8WV74 236 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 LINC01599Q8WXQ3 324 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 TM4SF18Q96CE8 201 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 HDAC8Q9BY41 377 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 MCCC2Q9HCC0 563 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 INPP5EQ9NRR6 644 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 NUDT1P36639 197 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 ATXN7L3Q14CW9 347 aaPredicted RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 ENTHD1Q8IYW4 607 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 ZSCAN5BA6NJL1 495 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 NPIPA2E9PIF3 369 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 NPIPA3F8WFD2 350 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 ARHGAP33O14559 1287 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 ATF4P18848 351 aaPredicted RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 MEPCEQ7L2J0 689 aaKnown RBP18.86■□□□□ 0.61
SOX12-201ENST00000342665 SDR9C7Q8NEX9 313 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 MYEOVQ96EZ4 313 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 VNN3Q9NY84 501 aa18.86■□□□□ 0.61
SOX12-201ENST00000342665 SLC9B1P1A6NJY1 282 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 ANKRD28O15084 1053 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 SLC6A12P48065 614 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 ZNF84P51523 738 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 OR1Q1Q15612 314 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 TANGO2Q6ICL3 276 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 C1orf94Q6P1W5 598 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 SLCO4A1Q96BD0 722 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 MRI1Q9BV20 369 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 TUBGCP6Q96RT7 1819 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 A8MVJ9 347 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 OR2T1O43869 369 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 RP2O75695 350 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 PTHP01270 115 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 UBL4AP11441 157 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 KCNJ5P48544 419 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 VAMP2P63027 116 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 NKX3-2P78367 333 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 SF3A2Q15428 464 aaKnown RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 RAB11BQ15907 218 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 TMEM52BQ4KMG9 183 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 TMEM53Q6P2H8 277 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 SLC46A3Q7Z3Q1 461 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 C16orf58Q96GQ5 468 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 POT1Q9NUX5 634 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 MRPL15Q9P015 296 aaKnown RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 NUFIP1Q9UHK0 495 aaKnown RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 AK6Q9Y3D8 172 aaKnown RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 LAMB2P55268 1798 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 SDC3O75056 442 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 PCSK6P29122 969 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 XCR1P46094 333 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 GDI2P50395 445 aaKnown RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 ACTBP60709 375 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 ISL1P61371 349 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 ACTG1P63261 375 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 HES5Q5TA89 166 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 OR2G6Q5TZ20 316 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 OR4F15Q8NGB8 312 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 SACM1LQ9NTJ5 587 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 A0A1W2PQ09 198 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 FAM171A2A8MVW0 826 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 H0YGG7 62 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 ARF3P61204 181 aaPredicted RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 STX12Q86Y82 276 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 SPNS2Q8IVW8 549 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 C19orf43Q9BQ61 176 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 LMF2Q9BU23 707 aaKnown RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 ZNF471Q9BX82 626 aaPredicted RBP18.85■□□□□ 0.61
SOX12-201ENST00000342665 GLIPR2Q9H4G4 154 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 STARD5Q9NSY2 213 aa18.85■□□□□ 0.61
SOX12-201ENST00000342665 MED17Q9NVC6 651 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms