RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 MALT1Q9UDY8 824 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 EFCAB10A6NFE3 127 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PATE3B3GLJ2 98 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 M0R082 166 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 FOXS1O43638 330 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 KCNK2O95069 426 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 FOLR1P15328 257 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 CD79BP40259 229 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 RPS6KA3P51812 740 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 AFF3P51826 1226 aaKnown RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 CAV3P56539 151 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 SKP1P63208 163 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 FAM98AQ8NCA5 519 aaKnown RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 C16orf52Q8NHV5 167 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 ZNF563Q8TA94 476 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PTGFRNQ9P2B2 879 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PLCL2Q9UPR0 1127 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 IFT52Q9Y366 437 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 HSPE1-MOB4S4R3N1 261 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 A0A1W2PRQ8 180 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 BLOC1S5-TXNDC5H3BN57 136 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PSMD9O00233 223 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 MAGEB4O15481 346 aaPredicted RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 TNFSF14O43557 240 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PIAS2O75928 621 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PPP1R3DO95685 299 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 HTR2AP28223 471 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 ARRB1P49407 418 aaPredicted RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 TUBA3CQ13748 450 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 MLC1Q15049 377 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 ZNF770Q6IQ21 691 aaPredicted RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 LAPTM4BQ86VI4 370 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 OR4C3Q8NH37 302 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 APOBEC4Q8WW27 367 aaKnown RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 TM9SF2Q99805 663 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 NUAK2Q9H093 628 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 ENKD1Q9H0I2 346 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 KLHL1Q9NR64 748 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 FLRT3Q9NZU0 649 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 TBX1O43435 398 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 KIAA0513O60268 411 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 GDF9O60383 454 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 RPLP0P05388 317 aaKnown RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 CLUP10909 449 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 TSFMP43897 325 aaKnown RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 PLAG1Q6DJT9 500 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 WDR88Q6ZMY6 472 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 CYP4Z2PQ8N1L4 340 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 NLGN4YQ8NFZ3 816 aaPredicted RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 GNPDA2Q8TDQ7 276 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 TMEM239Q8WW34 195 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 HTRA1Q92743 480 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 TCTN2Q96GX1 697 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 TMEM80Q96HE8 168 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 ZNF559Q9BR84 538 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 ORAI3Q9BRQ5 295 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 FN3KQ9H479 309 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 BCL2L10Q9HD36 194 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 KCND3Q9UK17 655 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 CAB39Q9Y376 341 aaPredicted RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 RPL36Q9Y3U8 105 aaKnown RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 RTTNQ86VV8 2226 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 DENND4AQ7Z401 1863 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 DUX1O43812 170 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 GTF2E2P29084 291 aaKnown RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 S100A5P33763 92 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 SOX18P35713 384 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 NAA10P41227 235 aaPredicted RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 NR0B1P51843 470 aaKnown RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 EIPR1Q53HC9 387 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 SYT14P1Q58G82 188 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 C22orf42Q6IC83 251 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 UBE2J2Q8N2K1 259 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 ANKK1Q8NFD2 765 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 MAFAQ8NHW3 353 aaPredicted RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 FAM174AQ8TBP5 190 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 ACOT11Q8WXI4 607 aaPredicted RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 FKBP10Q96AY3 582 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 FOXN4Q96NZ1 517 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 CD180Q99467 661 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 OR10A5Q9H207 317 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 OR52D1Q9H346 318 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 LYRM4Q9HD34 91 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 CLEC4AQ9UMR7 237 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 A0A1W2PPK0 400 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 AGAP5A6NIR3 686 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 TRIM64CA6NLI5 447 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 LMO7DNF2Z398 122 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 ARHGAP33O14559 1287 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 OXSR1O95747 527 aaPredicted RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 IGKV1D-16P01601 117 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 THY1P04216 161 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 DBIP07108 87 aaKnown RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 HNRNPCP07910 306 aaKnown RBP eCLIP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 JUNBP17275 347 aaPredicted RBP9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 IDUAP35475 653 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 ILKQ13418 452 aa9.42□□□□□ -0.9
RBFOX1-202ENST00000340209 ELOAQ14241 798 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms