RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 CLCF1Q9UBD9 225 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 VDAC3Q9Y277 283 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 PDZD2O15018 2839 aa13.2□□□□□ -0.3
ERCC1-203ENST00000340192 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 H0YC42 278 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 ZNF195O14628 629 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 TMIGD3P0DMS9 266 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-203ENST00000340192 IDO1P14902 403 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-203ENST00000340192 CTSSP25774 331 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 RNF144AP50876 292 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-203ENST00000340192 AGFG1P52594 562 aaKnown RBP13.19□□□□□ -0.3
ERCC1-203ENST00000340192 TPD52P55327 224 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-203ENST00000340192 CLDN15P56746 228 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 TMEM44Q2T9K0 475 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 KLHL26Q53HC5 615 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERCC1-203ENST00000340192 MEIOBQ8N635 442 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 ACTRT2Q8TDY3 377 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 WNT2BQ93097 391 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 MARK4Q96L34 752 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 CCDC115Q96NT0 180 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 SDF2Q99470 211 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 TM9SF2Q99805 663 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 SH3GL2Q99962 352 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 OR51I1Q9H343 314 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
ERCC1-203ENST00000340192 A0A087WZY1 265 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 NPIPB9F8W1W9 429 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 SYT5O00445 386 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 SEC14L5O43304 696 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 HCRTR2O43614 444 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 RCBTB2O95199 551 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 PGRP06401 933 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ZNF17P17021 662 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 SSTR2P30874 369 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 OPRM1P35372 400 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 CHI3L1P36222 383 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ASCL1P50553 236 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ZNF41P51814 821 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-203ENST00000340192 SUCLG1P53597 346 aaKnown RBP13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ATP12AP54707 1039 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 DLX5P56178 289 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 CLDN20P56880 219 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ZNF117Q03924 483 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 FOXF2Q12947 444 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ARHGAP11BQ3KRB8 267 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 SAXO2Q658L1 398 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 CHMP1BQ7LBR1 199 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 MTERF4Q7Z6M4 381 aaKnown RBP13.18□□□□□ -0.3
ERCC1-203ENST00000340192 GRAMD2AQ8IUY3 354 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 GCNT2Q8N0V5 402 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 GOLGA6L1Q8N7Z2 621 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 CHDHQ8NE62 594 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-203ENST00000340192 B4GALNT2Q8NHY0 566 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 LRRC8CQ8TDW0 803 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 SMPDL3BQ92485 455 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 INTS12Q96CB8 462 aaKnown RBP13.18□□□□□ -0.3
ERCC1-203ENST00000340192 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 C7orf26Q96N11 449 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ZFP3Q96NJ6 502 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 OR52E6Q96RD3 313 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 ZBTB18Q99592 522 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 NPAS1Q99742 590 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 KLHDC3Q9BQ90 382 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 SLC35A5Q9BS91 424 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 MED17Q9NVC6 651 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 AP4B1Q9Y6B7 739 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 USH1CQ9Y6N9 552 aa13.18□□□□□ -0.3
ERCC1-203ENST00000340192 HMGB1P1B2RPK0 211 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-203ENST00000340192 H3BNH8 94 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 OIP5O43482 229 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 FCMRO60667 390 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 DIAPH2O60879 1101 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 STX11O75558 287 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 SLC22A3O75751 556 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 TGM6O95932 706 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 IL18BPO95998 194 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 AK1P00568 194 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 C1QCP02747 245 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 OR12D1P0DN82 309 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 UQCRC1P31930 480 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 EEFSECP57772 596 aaKnown RBP13.17□□□□□ -0.3
ERCC1-203ENST00000340192 GPR68Q15743 365 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 PLPPR5Q32ZL2 321 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 PDCD4Q53EL6 469 aaKnown RBP13.17□□□□□ -0.3
ERCC1-203ENST00000340192 TNFAIP8L2Q6P589 184 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-203ENST00000340192 CBLN3Q6UW01 205 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 OLIG3Q7RTU3 272 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 C16orf62Q7Z3J2 963 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 GTPBP8Q8N3Z3 284 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-203ENST00000340192 ZNF614Q8N883 585 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 GLB1L3Q8NCI6 653 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-203ENST00000340192 DYDC1Q8WWB3 177 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 RAB8BQ92930 207 aa13.17□□□□□ -0.3
ERCC1-203ENST00000340192 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms