RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 TP53P04637 393 aaPredicted RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 CFHP08603 1231 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 DLX5P56178 289 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 ECM1Q16610 540 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 C18orf63Q68DL7 685 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 GAREM2Q75VX8 874 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 MS4A15Q8N5U1 240 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 OR5D14Q8NGL3 314 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 ITPKCQ96DU7 683 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 BTF3L4Q96K17 158 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 PRAP1Q96NZ9 151 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 SOCS6O14544 535 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 SEC14L5O43304 696 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 PKLRP30613 574 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 AKR1C1Q04828 323 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 RFTN1Q14699 578 aaPredicted RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 FXNQ16595 210 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 PLPPR4Q7Z2D5 763 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 OR4N5Q8IXE1 308 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 CPXM2Q8N436 756 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 OR2T4Q8NH00 348 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 ARV1Q9H2C2 271 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 TMEM98Q9Y2Y6 226 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 CNTNAP4Q9C0A0 1308 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 NFKBIEO00221 500 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 ICMTO60725 284 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 APEHP13798 732 aaKnown RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 PPP3CBP16298 524 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 RPS24P62847 133 aaKnown RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 MEF2DQ14814 521 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 NECAP1Q8NC96 275 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 MIB2Q96AX9 1013 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 ZNF251Q9BRH9 671 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 METTL17Q9H7H0 456 aaPredicted RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 PRODH2Q9UF12 536 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 GAPDHSO14556 408 aaPredicted RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 PHYHO14832 338 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 KCNK2O95069 426 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 DUSP7Q16829 419 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
USP47-202ENST00000339865 TMEM217Q8N7C4 229 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 OR10Z1Q8NGY1 313 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 OR52P1PQ8NH57 321 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 CLEC4CQ8WTT0 213 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 FEVQ99581 238 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 NOX3Q9HBY0 568 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 GIMAP2Q9UG22 337 aa12.16□□□□□ -0.46
USP47-202ENST00000339865 F6UZH7 168 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 HAX1O00165 279 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 SIX6O95475 246 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 EBLN1P0CF75 366 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 CNR2P34972 360 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 FAM69BQ5VUD6 431 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 ESPNLQ6ZVH7 1005 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 ZNF160Q9HCG1 818 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 MYOTQ9UBF9 498 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 NCOA3Q9Y6Q9 1424 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 HNRNPA2B1P22626 353 aaKnown RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 LAP3P28838 519 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 GK3PQ14409 553 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 GRM2Q14416 872 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 UGT3A2Q3SY77 523 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 PKDCCQ504Y2 493 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 VARS2Q5ST30 1063 aaKnown RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 TSPYL5Q86VY4 417 aaPredicted RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 SALL4Q9UJQ4 1053 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 NPIPA5A0A0B4J1W7 369 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 LYPLA2O95372 231 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 RNH1P13489 461 aaKnown RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 HNF1AP20823 631 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 MLF1P58340 268 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 GABARAPL2P60520 117 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 ARG2P78540 354 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 LRRTM1Q86UE6 522 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 SCAMP5Q8TAC9 235 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 SGTBQ96EQ0 304 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 TMEM59Q9BXS4 323 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 ARHGAP39Q9C0H5 1083 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 A2ML1A8K2U0 1454 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 ANKRD66B4E2M5 251 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 IMPA1P29218 277 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 OPCMLQ14982 345 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 AGTRAPQ6RW13 159 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 ENTHD1Q8IYW4 607 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 FRMD1Q8N878 549 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 OR9A4Q8NGU2 314 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 BLNKQ8WV28 456 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 NUDT9Q9BW91 350 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 POLHQ9Y253 713 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 UNC13BO14795 1591 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 MYBPHLA2RUH7 354 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 NUDT21O43809 227 aaKnown RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 SDC3O75056 442 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 TNFRSF1BP20333 461 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 EPHA4P54764 986 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 HBG1P69891 147 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 HBG2P69892 147 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms