RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CACNA1HO95180 2353 aa6.84□□□□□ -1.32
SRFBP1-201ENST00000339397 LRRN3E7EW58 273 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 DLL1O00548 723 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 LRRTM2O43300 516 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 LYPD3O95274 346 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 WISP1O95388 367 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 AGR2O95994 175 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CCNA2P20248 432 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 EPHA8P29322 1005 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ACAA2P42765 397 aaKnown RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 EPHA4P54764 986 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CDK5Q00535 292 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 FUT7Q11130 342 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 GARNL3Q5VVW2 1013 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 C16orf47Q6ZP98 133 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 RRM2BQ7LG56 351 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 STX19Q8N4C7 294 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 BCORP1Q8N888 145 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 POGLUT1Q8NBL1 392 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 OR4Q3Q8NH05 313 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 HOXB13Q92826 284 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC41A2Q96JW4 573 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 LRR1Q96L50 414 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 LRRN3Q9H3W5 708 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ERVMER34-1Q9H9K5 563 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC25A19Q9HC21 320 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 APMAPQ9HDC9 416 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 MEPEQ9NQ76 525 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 PLCXD1Q9NUJ7 323 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SATB2Q9UPW6 733 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 MRPS33Q9Y291 106 aaKnown RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CARD8Q9Y2G2 431 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 KIF26BQ2KJY2 2108 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TRIM64BA6NI03 449 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 H0YIG0 161 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SLITRK5O94991 958 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 DBIP07108 87 aaKnown RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ZGLP1P0C6A0 271 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ADORA3P0DMS8 318 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TTKP33981 857 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TGFBR2P37173 567 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TMBIM6P55061 237 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 HSD17B7P56937 341 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 EFNB1P98172 346 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 NSDHLQ15738 373 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SNAPC1Q16533 368 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SYT14P1Q58G82 188 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 FCRLBQ6BAA4 426 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CASP12Q6UXS9 341 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 HSDL2Q6YN16 418 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 C1orf210Q8IVY1 113 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 GPR135Q8IZ08 494 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF420Q8TAQ5 688 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ACOT11Q8WXI4 607 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 FGF11Q92914 225 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 YIPF6Q96EC8 236 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 DNAJA3Q96EY1 480 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 LMF2Q9BU23 707 aaKnown RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 NXF5Q9H1B4 397 aaKnown RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ENPP5Q9UJA9 477 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 MKL2Q9ULH7 1088 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 OR10H1Q9Y4A9 318 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 EP300Q09472 2414 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 MPDZO75970 2070 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 A0A1B0GTQ1 180 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 FAM183AA6NL82 134 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 OIP5O43482 229 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 LAMTOR5O43504 91 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 THBS1P07996 1170 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CD36P16671 472 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC15A1P46059 708 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 GCGRP47871 477 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ENTPD1P49961 510 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC37A1P57057 533 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TSPAN31Q12999 210 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TUBA3CQ13748 450 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC35F1Q5T1Q4 408 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TCEAL6Q6IPX3 200 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 LCN10Q6JVE6 187 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ZCCHC12Q6PEW1 402 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SMARCD3Q6STE5 483 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CBLN3Q6UW01 205 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CD300LDQ6UXZ3 194 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 THSD4Q6ZMP0 1018 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 MED25Q71SY5 747 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 BBS1Q8NFJ9 593 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 IPCEF1Q8WWN9 437 aaPredicted RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TCEAL3Q969E4 200 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 SAMD8Q96LT4 415 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 TSSK6Q9BXA6 273 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 VN1R1Q9GZP7 353 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CLN6Q9NWW5 311 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CBLCQ9ULV8 474 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 CSNK1G3Q9Y6M4 447 aa6.83□□□□□ -1.32
SRFBP1-201ENST00000339397 MED12Q93074 2177 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 SDK2Q58EX2 2172 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 TRAV27A0A087WT01 109 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms