RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 DRD5P21918 477 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 TTKP33981 857 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 ACY1Q03154 408 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 RHBDD2Q6NTF9 364 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 SLC23A3Q6PIS1 610 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 CASP12Q6UXS9 341 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 LANCL3Q6ZV70 420 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 GNPDA2Q8TDQ7 276 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 ARMC7Q9H6L4 198 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 PTTG2Q9NZH5 202 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 CLCA1A8K7I4 914 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 KPNA4O00629 521 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 ANKRD34CP0C6C1 535 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 ITIH1P19827 911 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 IFNGR2P38484 337 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 GIPRP48546 466 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 BIKQ13323 160 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 CLEC12AQ5QGZ9 265 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 C12orf73Q69YU5 71 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 TCEANCQ8N8B7 351 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 IPCEF1Q8WWN9 437 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 PMM1Q92871 262 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 GAL3ST4Q96RP7 486 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 G6PC3Q9BUM1 346 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 NRSN2Q9GZP1 204 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 NXF5Q9H1B4 397 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 PLCXD1Q9NUJ7 323 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 DNAJB12Q9NXW2 375 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 DNAJC27Q9NZQ0 273 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 FLRT3Q9NZU0 649 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 IL20RAQ9UHF4 553 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 CDC14CA4D256 554 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 SCRG1O75711 98 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 CKMT1AP12532 417 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 DCKP27707 260 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 CSNK2BP67870 215 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 OCA2Q04671 838 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 TSPAN31Q12999 210 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 AP1ARQ63HQ0 302 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 MBOAT2Q6ZWT7 520 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 MED25Q71SY5 747 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 PRSS48Q7RTY5 328 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 OR7G1Q8NGA0 311 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 OR8D4Q8NGM9 314 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 ZNF721Q8TF20 911 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 NUDT9Q9BW91 350 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 CCNB1IP1Q9NPC3 277 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 PCDHGB1Q9Y5G3 927 aa20.7■□□□□ 0.9
PDLIM2-203ENST00000339162 ZNF99A8MXY4 864 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 H3BMQ9 156 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 ENTPD6O75354 484 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 IGKV3-11P04433 115 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 STSP08842 583 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 GSTM3P21266 225 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 NR4A1P22736 598 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 HOXD12P35452 270 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 ELAVL1Q15717 326 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 YOD1Q5VVQ6 348 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 PRR22Q8IZ63 422 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 CACTIN-AS1Q8N1I8 211 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 B3GNT7Q8NFL0 401 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 PFN4Q8NHR9 129 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 RORBQ92753 470 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 COG8Q96MW5 612 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 SIGLEC11Q96RL6 698 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 CTRCQ99895 268 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 MKKSQ9NPJ1 570 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 ACOT13Q9NPJ3 140 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 OCIAD1Q9NX40 245 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 RARRES3Q9UL19 164 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 SRPK3Q9UPE1 567 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 IGHV3-20A0A0C4DH32 117 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 NPIPB9F8W1W9 429 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 CDC42EP2O14613 210 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 DYRK3O43781 588 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 PRKYO43930 277 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 ATE1O95260 518 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 FUT1P19526 365 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 ATP12AP54707 1039 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 DESI1Q6ICB0 168 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 GATSQ8NAP1 163 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 STT3BQ8TCJ2 826 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 DCUN1D5Q9BTE7 237 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 CLN6Q9NWW5 311 aa20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 TESQ9UGI8 421 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-203ENST00000339162 GPR179Q6PRD1 2367 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 SYNDIG1LA6NDD5 238 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 TRMUO75648 421 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 LYPD3O95274 346 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 LCKP06239 509 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 SP9P0CG40 484 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 RORAP35398 523 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 ZNF141Q15928 474 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 FKBP10Q96AY3 582 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 GFM1Q96RP9 751 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 C20orf141Q9NUB4 165 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 TLX2O43763 284 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 MPZL2O60487 215 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 ACAA2P42765 397 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 ST3GAL4Q11206 333 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms