RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 FGF16O43320 207 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 OR10H3O60404 316 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TPST2O60704 377 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SIX6O95475 246 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ESR1P03372 595 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 RPN2P04844 631 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SERPIND1P05546 499 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 UROSP10746 265 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SLC25A4P12235 298 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ETFAP13804 333 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 FOSL2P15408 326 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 PAX1P15863 534 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TYRP1P17643 537 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 RPIAP49247 311 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 CEBPDP49716 269 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ART1P52961 327 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 CRISP1P54107 249 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SLC10A7Q0GE19 358 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SURF2Q15527 256 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TAF9Q16594 264 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 BSPRYQ5W0U4 402 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF385CQ66K41 422 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 PGBD2Q6P3X8 592 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 DNM1P34Q6PK57 102 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ABI3BPQ7Z7G0 1075 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 CYP4Z1Q86W10 505 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF548Q8NEK5 533 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 OR10G2Q8NGC3 310 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 OR13C8Q8NGS7 320 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 OR13C2Q8NGS9 318 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 OR1E3Q8WZA6 343 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 RSPRY1Q96DX4 576 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 PHF21BQ96EK2 531 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SHDQ96IW2 340 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ITCHQ96J02 903 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 PACRGQ96M98 296 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 NRIP2Q9BQI9 281 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 OR10A4Q9H209 315 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 RIOX1Q9H6W3 641 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 FKRPQ9H9S5 495 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 GPR83Q9NYM4 423 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 PLEKHB1Q9UF11 243 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SPIN1Q9Y657 262 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 DNMT3AQ9Y6K1 912 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 WNK3Q9BYP7 1800 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TCRBV16S1A1N1A0A5B0 115 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 MGAT4DA6NG13 374 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 IQCF5A8MTL0 148 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF705EA8MWA4 302 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 PHOX2AO14813 284 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SLC16A4O15374 487 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SUV39H1O43463 412 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SPDEFO95238 335 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 GABRA5P31644 462 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 DAPP51397 102 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 MRPS11P82912 194 aaKnown RBP3.9□□□□□ -1.78
NEDD4-201ENST00000338963 GFOD2Q3B7J2 385 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 MESTQ5EB52 335 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 PRSS36Q5K4E3 855 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 C10orf120Q5SQS8 335 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 ACOT7LQ6ZUV0 252 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 MARCH9Q86YJ5 346 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SMPDL3AQ92484 453 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TMEM159Q96B96 161 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TMEM47Q9BQJ4 181 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 C20orf85Q9H1P6 137 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 MYNNQ9NPC7 610 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SLCO1C1Q9NYB5 712 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TAS2R8Q9NYW2 309 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SPG21Q9NZD8 308 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 NCDNQ9UBB6 729 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 SLC7A11Q9UPY5 501 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 LRRC37A3O60309 1634 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 DIP2CQ9Y2E4 1556 aa3.9□□□□□ -1.78
NEDD4-201ENST00000338963 TNS3Q68CZ2 1445 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 NEMP2A6NFY4 417 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 GTPBP1O00178 669 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF593O00488 134 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TAAR5O14804 337 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 EMC8O43402 210 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 KAT7O95251 611 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MPGP29372 298 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 GNRHRP30968 328 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MAS1LP35410 378 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ERVFC1-1P60608 527 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SELENOTP62341 195 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 INSM1Q01101 510 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 GTF2H2Q13888 395 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MORN1Q5T089 497 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 CXorf57Q6NSI4 855 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 GTF2H2CQ6P1K8 395 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 OGFOD3Q6PK18 319 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 C1orf186Q6ZWK4 172 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 OR2W3Q7Z3T1 314 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TMPRSS11BQ86T26 416 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 CPNE8Q86YQ8 564 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 NAT16Q8N8M0 369 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 KCNE4Q8WWG9 221 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 PPP1R14AQ96A00 147 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 DPY30Q9C005 99 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms