RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LHFPL5Q8TAF8 219 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 TMEM19Q96HH6 336 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 DPH7Q9BTV6 452 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 PITHD1Q9GZP4 211 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-201ENST00000338910 AICDAQ9GZX7 198 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 A4GALTQ9NPC4 353 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 ZNF222Q9UK12 451 aa17.52■□□□□ 0.4
PSPC1-201ENST00000338910 LRIT2A6NDA9 550 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 SHISA7A6NL88 538 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 GABRPO00591 440 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TFPIP10646 304 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 ANXA3P12429 323 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 BTCP35070 178 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 SMIM11AP58511 58 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 PODNL1Q6PEZ8 512 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 GALNT11Q8NCW6 608 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 OR4E2Q8NGC2 313 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 CCL4L1Q8NHW4 92 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 OR1E3Q8WZA6 343 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TSACCQ96A04 125 aaPredicted RBP17.51■□□□□ 0.39
PSPC1-201ENST00000338910 OTULINQ96BN8 352 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TMED9Q9BVK6 235 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 SLC6A20Q9NP91 592 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 EXTL2Q9UBQ6 330 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TCRBV21S2A2A0A5A6 115 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 KCNJ13O60928 360 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TSPAN9O75954 239 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 DHFRP00374 187 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 HLA-DPB1P04440 258 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 SSR2P43308 183 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 MTNR1AP48039 350 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TPMTP51580 245 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 SNTA1Q13424 505 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 INSL4Q14641 139 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TNFAIP8L2Q6P589 184 aaPredicted RBP17.51■□□□□ 0.39
PSPC1-201ENST00000338910 ASB18Q6ZVZ8 466 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 SHFQ7M4L6 423 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 ZNF354BQ96LW1 612 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 OR2M4Q96R27 311 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 GPA33Q99795 319 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 RAB11FIP5Q9BXF6 653 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 ABCG5Q9H222 651 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 TBC1D17Q9HA65 648 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 A4GNTQ9UNA3 340 aa17.51■□□□□ 0.39
PSPC1-201ENST00000338910 GLOD5A6NK44 160 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 CLEC3AO75596 197 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 PEBP1P30086 187 aaKnown RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 KCNJ5P48544 419 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 PIN1Q13526 163 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 EXOSC2Q13868 293 aaKnown RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 CCINQ13939 588 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 FGFBP1Q14512 234 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 NDUFA9Q16795 377 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 MINDY4Q4G0A6 757 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 KLHL12Q53G59 568 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 TMEM91Q6ZNR0 172 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 TOR1AIP2Q8NFQ8 470 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 OR2L3Q8NG85 312 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 OR5P2Q8WZ92 322 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 SCARF2Q96GP6 870 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 DDX31Q9H8H2 851 aaKnown RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 A0A1W2PRQ8 180 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 PRICKLE3O43900 615 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 SUZ12Q15022 739 aaKnown RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 SLC36A4Q6YBV0 504 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 ZNF793Q6ZN11 406 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 CDH24Q86UP0 819 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 HGDQ93099 445 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 RFT1Q96AA3 541 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 THAP7Q9BT49 309 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-201ENST00000338910 LIN7BQ9HAP6 207 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 NUDT15Q9NV35 164 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 ZNF224Q9NZL3 707 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 CLCA2Q9UQC9 943 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 RNF215Q9Y6U7 377 aa17.5■□□□□ 0.39
PSPC1-201ENST00000338910 C2orf92A0A1B0GVN3 265 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 PRKRAO75569 313 aaKnown RBP17.49■□□□□ 0.39
PSPC1-201ENST00000338910 MPC2O95563 127 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 IFNA7P01567 189 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 RRASP10301 218 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 CXCL3P19876 107 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 SLC1A3P43003 542 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 SMSP52788 366 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 LSM11P83369 360 aaKnown RBP eCLIP17.49■□□□□ 0.39
PSPC1-201ENST00000338910 GALEQ14376 348 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 SPDYE7PQ495Y7 208 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 CD276Q5ZPR3 534 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 BMP8AQ7Z5Y6 402 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 LHFPL3Q86UP9 236 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 OR4K5Q8NGD3 323 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 FAM3CQ92520 227 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 SLC9A6Q92581 669 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 RAB8BQ92930 207 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 NEURL3Q96EH8 262 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 BMFQ96LC9 184 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 DPCDQ9BVM2 203 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-201ENST00000338910 PLA2G12AQ9BZM1 189 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 KCNN2Q9H2S1 579 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 CYSLTR2Q9NS75 346 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms