RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NR1D2Q14995 579 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 LARS2Q15031 903 aaKnown RBP11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CEBPEQ15744 281 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 C16orf47Q6ZP98 133 aaPredicted RBP11.67□□□□□ -0.54
LIMK1-201ENST00000336180 OR13C2Q8NGS9 318 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 OR51Q1Q8NH59 317 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 TEX47Q8TBZ9 253 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 GAL3ST4Q96RP7 486 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 NUDT22Q9BRQ3 303 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 TIMMDC1Q9NPL8 285 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 MUTYHQ9UIF7 546 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 PI4KAP42356 2102 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CHURC1-FNTBB4DL54 471 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 STX11O75558 287 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 RFPL3O75679 317 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 KCNK2O95069 426 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 GABARAPO95166 117 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 IFI30P13284 250 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 MAKP20794 623 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 TSFMP43897 325 aaKnown RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 GSTM5P46439 218 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SERPINB10P48595 397 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 FNTBP49356 437 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 PCYT1AP49585 367 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 RACK1P63244 317 aaKnown RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 POU6F2P78424 691 aaPredicted RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 TUBA3CQ13748 450 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 INSL4Q14641 139 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 TRAM2Q15035 370 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 OR1Q1Q15612 314 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SYT14P1Q58G82 188 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SLX4IPQ5VYV7 408 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 GKN2Q86XP6 184 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SLC35F3Q8IY50 421 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SLC38A6Q8IZM9 456 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 OR51L1Q8NGJ5 315 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 OR4C3Q8NH37 302 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 TRMT61AQ96FX7 289 aaKnown RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 MGLLQ99685 303 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 PIGUQ9H490 435 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 MTHFD2LQ9H903 347 aaPredicted RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 DSPPQ9NZW4 1301 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 AGAP5A6NIR3 686 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 E9PQ18 207 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SOCS6O14544 535 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 CNOT3O75175 753 aaKnown RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 IGLV3-19P01714 112 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 MRPL3P09001 348 aaKnown RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SAGP10523 405 aaPredicted RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 RAB38P57729 211 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 NPSR1Q6W5P4 371 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SLC25A45Q8N413 288 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 IPCEF1Q8WWN9 437 aaPredicted RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 GATAD2BQ8WXI9 593 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SH3YL1Q96HL8 342 aaPredicted RBP11.66□□□□□ -0.54
LIMK1-201ENST00000336180 SIGLEC11Q96RL6 698 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 ARHGDIGQ99819 225 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 FBXL4Q9UKA2 621 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 LIPT1Q9Y234 373 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 IFT52Q9Y366 437 aa11.66□□□□□ -0.54
LIMK1-201ENST00000336180 DUXAA6NLW8 204 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 CLUP10909 449 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 FOLR1P15328 257 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 RCVRNP35243 200 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ETV5P41161 510 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ETV1P50549 477 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 EFNA3P52797 238 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ST3GAL3Q11203 375 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 GNA13Q14344 377 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ARHGAP11BQ3KRB8 267 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 KLHL12Q53G59 568 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 OTPQ5XKR4 325 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 NLGN4YQ8NFZ3 816 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 PIGXQ8TBF5 258 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 THAP3Q8WTV1 239 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF764Q96H86 408 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 GPN2Q9H9Y4 310 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 FOLH1BQ9HBA9 442 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 CCNB1IP1Q9NPC3 277 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 CAB39Q9Y376 341 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 IMPA2O14732 288 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 OR2B3O76000 313 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 OMPP47874 163 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 PLAG1Q6DJT9 500 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 HEPHL1Q6MZM0 1159 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF619Q8N2I2 560 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 MOAP1Q96BY2 351 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF582Q96NG8 517 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 DGAT2Q96PD7 388 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 HCAR1Q9BXC0 346 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 LYRM4Q9HD34 91 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 MED12Q93074 2177 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 C4orf47A7E2U8 309 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 MAGEB4O15481 346 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 CSO75390 466 aaKnown RBP11.65□□□□□ -0.54
LIMK1-201ENST00000336180 SOX30O94993 753 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 ATP1B1P05026 303 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 HBQ1P09105 142 aa11.65□□□□□ -0.54
LIMK1-201ENST00000336180 RNH1P13489 461 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms