RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ACOT4Q8N9L9 421 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 MARVELD1Q9BSK0 173 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 SLC17A9Q9BYT1 436 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 TNFRSF10DQ9UBN6 386 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 FTSJ1Q9UET6 329 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 NUP210Q8TEM1 1887 aaPredicted RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 A0A0A6YYD5 115 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SLC22A23A1A5C7 686 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SLC35F4A4IF30 521 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 PEBP1P30086 187 aaKnown RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 MLLT1Q03111 559 aaPredicted RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 INSL4Q14641 139 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 CLLU1Q5K131 121 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 RTL4Q6ZR62 310 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 TMEFF1Q8IYR6 380 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 TCEANCQ8N8B7 351 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 OR6T1Q8NGN1 323 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 ZNF416Q9BWM5 594 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 BTBD1Q9H0C5 482 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 ZCCHC4Q9H5U6 513 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 NEUROD4Q9HD90 331 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 NUDT15Q9NV35 164 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 TVP23BQ9NYZ1 205 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 IQCMA0A1B0GVH7 501 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 DNAJB6O75190 326 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 IFNA7P01567 189 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 H1F0P07305 194 aaKnown RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 CHRM4P08173 479 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 TRIM23P36406 574 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SHHQ15465 462 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 GPALPP1Q8IXQ4 340 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 TSACCQ96A04 125 aaPredicted RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 ZNF578Q96N58 590 aaPredicted RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 GPA33Q99795 319 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 POLR2J3Q9H1A7 115 aaKnown RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 DDX31Q9H8H2 851 aaKnown RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 A4GALTQ9NPC4 353 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SLCO1C1Q9NYB5 712 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 TBC1D29Q9UFV1 150 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 STUB1Q9UNE7 303 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 NTNG1Q9Y2I2 539 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 RNGTTO60942 597 aaKnown RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 AIFM1O95831 613 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 CBX7O95931 251 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 MC3RP41968 323 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 HMGA2P52926 109 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 ID2Q02363 134 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 PUDPQ08623 228 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 MAP4K2Q12851 820 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SLC9A5Q14940 896 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 PODNL1Q6PEZ8 512 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 SFTPA2Q8IWL1 248 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 FAM181AQ8N9Y4 354 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 OR8D4Q8NGM9 314 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 OR9A2Q8NGT5 310 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 ZCCHC10Q8TBK6 192 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 MS4A6EQ96DS6 147 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 TTYH1Q9H313 450 aaPredicted RBP12.97□□□□□ -0.33
SF1-202ENST00000334944 PCDHB16Q9NRJ7 776 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 ACSL5Q9ULC5 683 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 CDH10Q9Y6N8 788 aa12.97□□□□□ -0.33
SF1-202ENST00000334944 ZAR1LA6NP61 321 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 K7EQS6 105 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 TLR4O00206 839 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 KHNYNO15037 678 aaKnown RBP12.96□□□□□ -0.33
SF1-202ENST00000334944 SLC43A1O75387 559 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 EPPINO95925 133 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 KCNJ5P48544 419 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 FUT5Q11128 374 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 KRT74Q7RTS7 529 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 IQCHQ86VS3 1027 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 DUSP18Q8NEJ0 188 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 OR2L3Q8NG85 312 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 KATNB1Q9BVA0 655 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 HCN3Q9P1Z3 774 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 APOBEC3BQ9UH17 382 aaKnown RBP12.96□□□□□ -0.33
SF1-202ENST00000334944 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
SF1-202ENST00000334944 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.33
SF1-202ENST00000334944 HYKKA2RU49 373 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 COL9A1P20849 921 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 C5AR1P21730 350 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 HIST1H1TP22492 207 aaPredicted RBP12.96□□□□□ -0.34
SF1-202ENST00000334944 SRP9P49458 86 aaKnown RBP12.96□□□□□ -0.34
SF1-202ENST00000334944 XKP51811 444 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.34
SF1-202ENST00000334944 BTN3A2P78410 334 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 RPE65Q16518 533 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.34
SF1-202ENST00000334944 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 KIAA1161Q6NSJ0 714 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 DENND6BQ8NEG7 585 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 ZNF354BQ96LW1 612 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 CDCA4Q9BXL8 241 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 CHIAQ9BZP6 476 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 PIGUQ9H490 435 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 SEC14L4Q9UDX3 406 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms