RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CAV3P56539 151 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 NSDHLQ15738 373 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF791Q3KP31 576 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 PAMR1Q6UXH9 720 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 COX18Q8N8Q8 333 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 OR9A4Q8NGU2 314 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 SORBS1Q9BX66 1292 aaKnown RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 SGPP1Q9BX95 441 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 MRPL15Q9P015 296 aaKnown RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF69Q9UC07 566 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 KIAA1671Q9BY89 1806 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 LOC105369274A0A096LPK9 316 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 PRR33A8MZF0 331 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 NUPL2O15504 423 aaKnown RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 ENTPD6O75354 484 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 FAUP35544 74 aaKnown RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 RNF144AP50876 292 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 CXCR4P61073 352 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 REEP5Q00765 189 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 RGNQ15493 299 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 C3orf38Q5JPI3 329 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 NDUFAF5Q5TEU4 345 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 OR4N4Q8N0Y3 316 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 SLC22A18ASQ8N1D0 253 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 GALNT6Q8NCL4 622 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 OR2A1Q8NGT9 310 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 ADAMTS18Q8TE60 1221 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 C16orf78Q8WTQ4 265 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 RFT1Q96AA3 541 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF304Q9HCX3 659 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 TMEM74BQ9NUR3 256 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 ABI3Q9P2A4 366 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 POLR1DQ9Y2S0 133 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 MED16Q9Y2X0 877 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 WWP2O00308 870 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 OR12D1P0DN82 309 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 HOXA6P31267 233 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 OR1D4P47884 311 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 CCL7P80098 99 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 PIN1Q13526 163 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 GGTA1PQ4G0N0 100 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 SLC25A25Q6KCM7 469 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 SLC29A4Q7RTT9 530 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF551Q7Z340 670 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 KLBQ86Z14 1044 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 DEFB124Q8NES8 71 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 OR51I1Q9H343 314 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 NMNAT1Q9HAN9 279 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-201ENST00000334136 NEUROD4Q9HD90 331 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 MKL2Q9ULH7 1088 aa11.04□□□□□ -0.64
HDAC6-201ENST00000334136 REM1O75628 298 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 ALPPP05187 535 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 JUNBP17275 347 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 HIST1H1TP22492 207 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 TGFBR2P37173 567 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 OC90Q02509 493 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 GPR19Q15760 415 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 PLAG1Q6DJT9 500 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 SLC27A4Q6P1M0 643 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 TMEM71Q6P5X7 295 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 OR5H6Q8NGV6 325 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 CCDC120Q96HB5 630 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 CTRCQ99895 268 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 CRB3Q9BUF7 120 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 ULBP3Q9BZM4 244 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 FKBP7Q9Y680 259 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 DUXAA6NLW8 204 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 J3KTA2 159 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 PCDHGA12O60330 932 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 JRKO75564 520 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 SULT1C4O75897 302 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 B3GALT4O96024 378 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 CSN2P05814 226 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 ANXA3P12429 323 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 XCR1P46094 333 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 EPHA4P54764 986 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 PPP3R1P63098 170 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 SELENOWP63302 87 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 MC1RQ01726 317 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 RPS26P11Q5JNZ5 115 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 SLITRK4Q8IW52 837 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 LAX1Q8IWV1 398 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 COQ8AQ8NI60 647 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 OR5M11Q96RB7 305 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF300Q96RE9 604 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 TMEM27Q9HBJ8 222 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 DHCR7Q9UBM7 475 aaKnown RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 MLXQ9UH92 298 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 ASB1Q9Y576 335 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 LOC102723532A0A0G2JNH3 316 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 FOXE1O00358 373 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 PCDH17O14917 1159 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 PROM1O43490 865 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 RPP14O95059 124 aaKnown RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 ADORA3P0DMS8 318 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 AP3S2P59780 193 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 TBCEQ15813 527 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 NTRK2Q16620 822 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 TATDN3Q17R31 274 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 CNIH2Q6PI25 160 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms