RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 CCDC120Q96HB5 630 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 PITX2Q99697 317 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 IRF2BPLQ9H1B7 796 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 TTC3P53804 2025 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 ACPPP15309 386 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 RAB3BP20337 219 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 ADPRHP54922 357 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 PSMA6P60900 246 aaKnown RBP12.19□□□□□ -0.46
VSTM4-202ENST00000332853 DUSP6Q16828 381 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 EEF1A1P5Q5VTE0 462 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 BCDIN3DQ7Z5W3 292 aaKnown RBP12.19□□□□□ -0.46
VSTM4-202ENST00000332853 DDIT4LQ96D03 193 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 BTBD2Q9BX70 525 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 BAIAP2Q9UQB8 552 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 GAB1Q13480 694 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 HYAL4Q2M3T9 481 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 OR2T4Q8NH00 348 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 NIPSNAP1Q9BPW8 284 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 ZDHHC5Q9C0B5 715 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 TP63Q9H3D4 680 aaPredicted RBP12.19□□□□□ -0.46
VSTM4-202ENST00000332853 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
VSTM4-202ENST00000332853 COL11A1P12107 1806 aaPredicted RBP12.19□□□□□ -0.46
VSTM4-202ENST00000332853 KIAA0100Q14667 2235 aaKnown RBP12.19□□□□□ -0.46
VSTM4-202ENST00000332853 TPD52L2O43399 206 aaKnown RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 CTHP32929 405 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 METAP1P53582 386 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 NR0B2Q15466 257 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 CD300LGQ6UXG3 332 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TMEM17Q86X19 198 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 ZNF615Q8N8J6 731 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 AMDHD1Q96NU7 426 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 FGF22Q9HCT0 170 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 THSD1Q9NS62 852 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 GFYI3L273 518 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 RPS5P46782 204 aaKnown RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TPMTP51580 245 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 METRNLQ641Q3 311 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 CCDC80Q76M96 950 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PTRH1Q86Y79 214 aaKnown RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 METTL25Q8N6Q8 603 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 ACOT11Q8WXI4 607 aaPredicted RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 HAVCR1Q96D42 359 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 POT1Q9NUX5 634 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 SH2B3Q9UQQ2 575 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PCDHGB6Q9Y5F9 930 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 A0A1B0GVC2 190 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 A6NIN4 97 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TFAP2AP05549 437 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TBC1D25Q3MII6 688 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 RBM12BQ8IXT5 1001 aaKnown RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OR1E3Q8WZA6 343 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 UBE2FQ969M7 185 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PADI2Q9Y2J8 665 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 AK6Q9Y3D8 172 aaKnown RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 FBXO45P0C2W1 286 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 CA5AP35218 305 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TLE3Q04726 772 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OR13C2Q8NGS9 318 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PGAM5Q96HS1 289 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 SLC25A18Q9H1K4 315 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 ADAM29Q9UKF5 820 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TMEM14AQ9Y6G1 99 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TVP23AA6NH52 213 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 MAGEA8P43361 318 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PDX1P52945 283 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 NKX2-5P52952 324 aaPredicted RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PPP5CP53041 499 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 S100A10P60903 97 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OR7A5Q15622 319 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 C9orf50Q5SZB4 431 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OR2G6Q5TZ20 316 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TRMT10AQ8TBZ6 339 aaKnown RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PATE1Q8WXA2 126 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 RPL3LQ92901 407 aaKnown RBP12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OR5B2Q96R09 309 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OR4K3Q96R72 315 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 LMF1Q96S06 567 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 PLAC1Q9HBJ0 212 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 OLAHQ9NV23 265 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 TBC1D29Q9UFV1 150 aa12.18□□□□□ -0.46
VSTM4-202ENST00000332853 POM121BA6NF01 834 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 AQP9O43315 295 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 SYNGR4O95473 234 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 ZNF84P51523 738 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 EMP2P54851 167 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 EEF1A2Q05639 463 aaKnown RBP12.17□□□□□ -0.46
VSTM4-202ENST00000332853 FAM71E1Q6IPT2 247 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 CYHR1Q6ZMK1 362 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 C15orf40Q8WUR7 153 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 ZNF304Q9HCX3 659 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 SACM1LQ9NTJ5 587 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 CUTCQ9NTM9 273 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 MED11Q9P086 117 aa12.17□□□□□ -0.46
VSTM4-202ENST00000332853 HSPB11Q9Y547 144 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms