RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SRSF5Q13243 272 aaKnown RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 SMAD4Q13485 552 aaKnown RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 OR2G6Q5TZ20 316 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 AADACL4Q5VUY2 407 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 SHFQ7M4L6 423 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 ARL14Q8N4G2 192 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 RFKQ969G6 155 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 SAMD8Q96LT4 415 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 PHF7Q9BWX1 381 aaPredicted RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 NUAK2Q9H093 628 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 POLE3Q9NRF9 147 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 QPCTLQ9NXS2 382 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 TMEM131Q92545 1883 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 ISPDA4D126 451 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 SAGE2PA6NJ88 616 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 SRPX2O60687 465 aaPredicted RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 FMO6PO60774 539 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 KCNK2O95069 426 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 LYPD3O95274 346 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 CSF2P04141 144 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 WNT1P04628 370 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 CPEP16870 476 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 S1PR1P21453 382 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 CAPZBP47756 277 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 FASLGP48023 281 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 RFX3P48380 749 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 PLAURQ03405 335 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 TDGQ13569 410 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 ELOCQ15369 112 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 TMEM44Q2T9K0 475 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 FLYWCH1Q4VC44 716 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 HSDL2Q6YN16 418 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 TMEM239Q8WW34 195 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 MAP3K3Q99759 626 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 DPH1Q9BZG8 443 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 TTYH1Q9H313 450 aaPredicted RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 ZNF223Q9UK11 482 aaPredicted RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 EXOSC1Q9Y3B2 195 aaKnown RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 SPIN1Q9Y657 262 aaPredicted RBP16.13■□□□□ 0.17
DDX28-201ENST00000332395 GON4LQ3T8J9 2241 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 ZNF670-ZNF695F2Z2N8 137 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 RNH1P13489 461 aaKnown RBP16.12■□□□□ 0.17
DDX28-201ENST00000332395 RPS19P39019 145 aaKnown RBP16.12■□□□□ 0.17
DDX28-201ENST00000332395 PSG6Q00889 435 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 ZC3H14Q6PJT7 736 aaKnown RBP16.12■□□□□ 0.17
DDX28-201ENST00000332395 RNF113BQ8IZP6 322 aaKnown RBP16.12■□□□□ 0.17
DDX28-201ENST00000332395 ZNF687Q8N1G0 1237 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 PARP16Q8N5Y8 322 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 PFN4Q8NHR9 129 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 HOXD1Q9GZZ0 328 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 ABCB10Q9NRK6 738 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 C20orf141Q9NUB4 165 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 SSR3Q9UNL2 185 aa16.12■□□□□ 0.17
DDX28-201ENST00000332395 UNC119BA6NIH7 251 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 TGFBR3LH3BV60 316 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 FOXS1O43638 330 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 CDC123O75794 336 aaPredicted RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 SLC2A10O95528 541 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 HMGN1P05114 100 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 LIMS3P0CW19 117 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 LIMS4P0CW20 117 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 NME1P15531 152 aaKnown RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 POU3F3P20264 500 aaPredicted RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 SKP1P63208 163 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 AKAP14Q86UN6 197 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 LYSMD2Q8IV50 215 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 BRIX1Q8TDN6 353 aaKnown RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 TM9SF4Q92544 642 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 RIT1Q92963 219 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 TCTN2Q96GX1 697 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 PEX11GQ96HA9 241 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 KCNS3Q9BQ31 491 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 LMF2Q9BU23 707 aaKnown RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 OR52D1Q9H346 318 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 UBQLN3Q9H347 655 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 FOLH1BQ9HBA9 442 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 SIDT1Q9NXL6 827 aaKnown RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 CA14Q9ULX7 337 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 CSNK1G3Q9Y6M4 447 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 A0A075B6Q4 140 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 A8MU76 341 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 TBX1O43435 398 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 PROS1P07225 676 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 TSPAN19P0C672 248 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 ZGLP1P0C6A0 271 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 IFI30P13284 250 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 MAKP20794 623 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 CD27P26842 260 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 CD38P28907 300 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 EMDP50402 254 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 IFITM2Q01629 132 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 BNC1Q01954 994 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 STX4Q12846 297 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 ZNHIT3Q15649 155 aaPredicted RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 PDZK1Q5T2W1 519 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 NXNL2Q5VZ03 156 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 LAPTM4BQ86VI4 370 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 BBS1Q8NFJ9 593 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 FANK1Q8TC84 345 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 LMX1AQ8TE12 382 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms