RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 MYNNQ9NPC7 610 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 PLCXD1Q9NUJ7 323 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 GRHPRQ9UBQ7 328 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 CCKBRP32239 447 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 EIF5AP63241 154 aaKnown RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 TAGLNQ01995 201 aaKnown RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 SQSTM1Q13501 440 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 IRF5Q13568 498 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ALG10BQ5I7T1 473 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF584Q8IVC4 421 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ACOT11Q8WXI4 607 aaPredicted RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 S100PBPQ96BU1 408 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 IGSF21Q96ID5 467 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 HS6ST2Q96MM7 605 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 SPTBP11277 2137 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 C1orf226A1L170 272 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 PEX14O75381 377 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 FURINP09958 794 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 CXCR1P25024 350 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 CCDC190Q86UF4 302 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 NRROSQ86YC3 692 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 LINC01465Q8N7H1 131 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 CREB3L4Q8TEY5 395 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 ST8SIA2Q92186 375 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 SEC61A2Q9H9S3 476 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 TRAPPC13A5PLN9 417 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 DSCR3O14972 297 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 PRKRAO75569 313 aaKnown RBP13.19□□□□□ -0.3
EPHB3-201ENST00000330394 POLR2CP19387 275 aaPredicted RBP13.19□□□□□ -0.3
EPHB3-201ENST00000330394 ELK1P19419 428 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 DLX5P56178 289 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 SORDQ00796 357 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 C3orf38Q5JPI3 329 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 SFXN4Q6P4A7 337 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 MAFIPQ8WZ33 124 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 GHSRQ92847 366 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 SFXN2Q96NB2 322 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 CDCA4Q9BXL8 241 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 CSTAP01040 98 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 PSMB1P20618 241 aaKnown RBP13.19□□□□□ -0.3
EPHB3-201ENST00000330394 CERS1P27544 350 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 S100A2P29034 98 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 LSSP48449 732 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 RASGEF1AQ8N9B8 481 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 SYNPRQ8TBG9 265 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 NR4A3Q92570 626 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 ARSGQ96EG1 525 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 P2RY12Q9H244 342 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 IER3IP1Q9Y5U9 82 aa13.19□□□□□ -0.3
EPHB3-201ENST00000330394 SYPP08247 313 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 PRR35P0CG20 571 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TRAPPC2P0DI81 140 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TRAPPC2BP0DI82 140 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 IL1RNP18510 177 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 PFN3P60673 137 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 STK11Q15831 433 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 FBXO42Q6P3S6 717 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 METAP1DQ6UB28 335 aaPredicted RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 SLC9B2Q86UD5 537 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 DUSP19Q8WTR2 217 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 RAB11FIP5Q9BXF6 653 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 HHATLQ9HCP6 504 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 Q9N2J8 555 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 OR1A2Q9Y585 309 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TEX13DA0A0J9YY54 714 aaPredicted RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TEX51A0A1B0GUA7 166 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 C6P13671 934 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 DRD2P14416 443 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 SOX18P35713 384 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 RNASE10Q5GAN6 216 aaKnown RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 C17orf107Q6ZR85 190 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 KCTD20Q7Z5Y7 419 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 C1QTNF3Q9BXJ4 246 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 ATXN7L1Q9ULK2 861 aaPredicted RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 DCDC2BA2VCK2 349 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TMEM202A6NGA9 273 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 H0YIV9 168 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TYRP1P17643 537 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 NFYAP23511 347 aaPredicted RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 PRSS3P35030 304 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 HTR4Q13639 388 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 HBMQ6B0K9 141 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 FAHD1Q6P587 224 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 LRRC25Q8N386 305 aaPredicted RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TMEM239Q8WW34 195 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 SEC22AQ96IW7 307 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 OR52A4PA6NMU1 304 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 RNF13O43567 381 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 ADH5P11766 374 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 AGTR1P30556 359 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 XCR1P46094 333 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF385BQ569K4 471 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms