RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LRRC18Q8N456 261 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CD99L2Q8TCZ2 262 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 HIST1H2BAQ96A08 127 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 LCORQ96JN0 433 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 SLC6A18Q96N87 628 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 TSPAN10Q9H1Z9 355 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 GOLGA2P5Q9HBQ8 144 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CYSLTR2Q9NS75 346 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 KLK14Q9P0G3 267 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ARL5AQ9Y689 179 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM189-UBE2V1I3L0A0 370 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 AP4M1O00189 453 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 OR7A17O14581 309 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 TNFRSF1BP20333 461 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 MPGP29372 298 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 BDKRB2P30411 391 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 PITPNBP48739 271 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 IL2P60568 153 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 MAXP61244 160 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 TNFRSF9Q07011 255 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 SLC10A7Q0GE19 358 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 DHCR24Q15392 516 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 SURF2Q15527 256 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 ARHGAP11AQ6P4F7 1023 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 MSANTD1Q6ZTZ1 278 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 GOLGA7Q7Z5G4 137 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 EGLN1Q9GZT9 426 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 OR10A4Q9H209 315 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 SMOC1Q9H4F8 434 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 WDR26Q9H7D7 661 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 SERHLQ9NQF3 203 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 NLE1Q9NVX2 485 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 ZNF69Q9UC07 566 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 NINQ8N4C6 2090 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 SUV39H1O43463 412 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 ANXA2P07355 339 aaKnown RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 HSD3B1P14060 373 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 RCC1P18754 421 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 RAD52P43351 418 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 CCR9P51686 369 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 C18orf63Q68DL7 685 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 SFRP4Q6FHJ7 346 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 PLBD1Q6P4A8 553 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM71Q6P5X7 295 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 TSEN54Q7Z6J9 526 aaKnown RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 SLITRK4Q8IW52 837 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 CDKN2AIPNLQ96HQ2 116 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 DPH2Q9BQC3 489 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 TWSG1Q9GZX9 223 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM231Q9H6L2 316 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 DUSP22Q9NRW4 184 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 ASF1BQ9NVP2 202 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
SHMT2-201ENST00000328923 DOCK4Q8N1I0 1966 aa11.09□□□□□ -0.63
SHMT2-201ENST00000328923 C2orf92A0A1B0GVN3 265 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 GSAPA4D1B5 854 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 HMSDA8MTL9 139 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 B4GALT3O60512 393 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 NDUFS3O75489 264 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 YIF1AO95070 293 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 CD2P06729 351 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 RHOP08100 348 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SAGP10523 405 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 CYBAP13498 195 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 GJA1P17302 382 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF140P52738 457 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 PNLIPRP2P54317 469 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 CDH12P55289 794 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 DGCR2P98153 550 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 GTF2H2Q13888 395 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 GAMTQ14353 236 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 GTF2H2CQ6P1K8 395 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ETV3LQ6ZN32 361 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 CBLL1Q75N03 491 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 TRIM46Q7Z4K8 759 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 MARCH9Q86YJ5 346 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 OR5M3Q8NGP4 307 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 OR6K3Q8NGY3 331 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 UBL7Q96S82 380 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 FZD3Q9NPG1 666 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ISYNA1Q9NPH2 558 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SIRT7Q9NRC8 400 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ALPK3Q96L96 1907 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SCN10AQ9Y5Y9 1956 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 TMEM72A0PK05 275 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 MYBPHLA2RUH7 354 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ANHXE9PGG2 379 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 FOXE1O00358 373 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 MBTPS2O43462 519 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SOX15O60248 233 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ANXA8P13928 327 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 PKMP14618 531 aaKnown RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 PAX6P26367 422 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms