RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 EBPQ15125 230 aaKnown RBP16.46■□□□□ 0.23
RAB39A-201ENST00000320578 PRICKLE2Q7Z3G6 844 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 CLDN22Q8N7P3 220 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 ZNF321PQ8N8H1 164 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 WDR36Q8NI36 951 aaKnown RBP16.46■□□□□ 0.23
RAB39A-201ENST00000320578 CNOT9Q92600 299 aaKnown RBP16.46■□□□□ 0.23
RAB39A-201ENST00000320578 UBE2FQ969M7 185 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 HSPBAP1Q96EW2 488 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 SIGLEC11Q96RL6 698 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 SLC25A19Q9HC21 320 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 RASSF1Q9NS23 344 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 FKBP14Q9NWM8 211 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 PAK1IP1Q9NWT1 392 aaPredicted RBP16.46■□□□□ 0.23
RAB39A-201ENST00000320578 OCIAD1Q9NX40 245 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 SLC7A7Q9UM01 511 aa16.46■□□□□ 0.23
RAB39A-201ENST00000320578 SEC16AO15027 2179 aa16.46■□□□□ 0.22
RAB39A-201ENST00000320578 COL5A1P20908 1838 aaPredicted RBP16.45■□□□□ 0.22
RAB39A-201ENST00000320578 C2orf92A0A1B0GVN3 265 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 XPNPEP2O43895 674 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 CPNE3O75131 537 aaKnown RBP16.45■□□□□ 0.22
RAB39A-201ENST00000320578 ITIH1P19827 911 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 GPR143P51810 404 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 CDK5Q00535 292 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 CNPY1Q3B7I2 92 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 TMEM201Q5SNT2 666 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 SLC25A30Q5SVS4 291 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 XAF1Q6GPH4 301 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 PRSS48Q7RTY5 328 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 MRGPREQ86SM8 312 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF527Q8NB42 609 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 MPP4Q96JB8 637 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 GPA33Q99795 319 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 NXF5Q9H1B4 397 aaKnown RBP16.45■□□□□ 0.22
RAB39A-201ENST00000320578 PSORS1C1Q9UIG5 152 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 NTNG1Q9Y2I2 539 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 A0A0B4J2E0 115 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 A0A1B0GX12 115 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 PTGES3LE9PB15 166 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 H3BN98 237 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 FAM20BO75063 409 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 HEXBP07686 556 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 GKN3PP0CG01 181 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 CCKBRP32239 447 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 RFX3P48380 749 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 GIPRP48546 466 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 MVKQ03426 396 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 FOXD4Q12950 439 aaPredicted RBP16.45■□□□□ 0.22
RAB39A-201ENST00000320578 PMS2P3Q13401 168 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 SLC29A4Q7RTT9 530 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 CCDC103Q8IW40 242 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF441Q8N8Z8 693 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF540Q8NDQ6 660 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 FAM71CQ8NEG0 241 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 OR8J1Q8NGP2 316 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 TMIGD2Q96BF3 282 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 Q96MT0 163 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 SEMA4CQ9C0C4 833 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 SMOC1Q9H4F8 434 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 CXorf56Q9H5V9 222 aa16.45■□□□□ 0.22
RAB39A-201ENST00000320578 IDSB3KWA1 339 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 RGS10O43665 173 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 CHP2O43745 196 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 ALOX12BO75342 701 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 BCAS1O75363 584 aaPredicted RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 NGFRP08138 427 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 TBXA2RP21731 343 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 PCMT1P22061 227 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 POU1F1P28069 291 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 RBM34P42696 430 aaKnown RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 FNDC7Q5VTL7 733 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 HLA-DQA1Q5Y7H0 255 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 CASP12Q6UXS9 341 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 PTCHD4Q6ZW05 846 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 ANKRD37Q7Z713 158 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 C9orf40Q8IXQ3 194 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 SVOPQ8N4V2 548 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 OR4C3Q8NH37 302 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF420Q8TAQ5 688 aaPredicted RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 RHBDD1Q8TEB9 315 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 TP53INP1Q96A56 240 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 CCNL2Q96S94 520 aaPredicted RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 WWTR1Q9GZV5 400 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 WDR54Q9H977 334 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 EXOSC3Q9NQT5 275 aaKnown RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 RXFP3Q9NSD7 469 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF223Q9UK11 482 aaPredicted RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 NXT1Q9UKK6 140 aaKnown RBP16.44■□□□□ 0.22
RAB39A-201ENST00000320578 TMEM5Q9Y2B1 443 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 BDP1A6H8Y1 2624 aa16.44■□□□□ 0.22
RAB39A-201ENST00000320578 LNP1A1A4G5 178 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 CLCA1A8K7I4 914 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 B4E171 279 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 H3BSA7 217 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 MEN1O00255 615 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 SEC14L2O76054 403 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 ENDOUP21128 410 aaKnown RBP16.43■□□□□ 0.22
RAB39A-201ENST00000320578 TSPAN7P41732 249 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 SMSP52788 366 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 LSM11P83369 360 aaKnown RBP eCLIP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms