RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SRMSQ9H3Y6 488 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 PRDM7Q9NQW5 492 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 TMEM74BQ9NUR3 256 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 SLCO1C1Q9NYB5 712 aa14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 SF3B6Q9Y3B4 125 aaKnown RBP14.52□□□□□ -0.08
SHROOM1-201ENST00000319854 FCMRO60667 390 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 CPEP16870 476 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 GALEQ14376 348 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 MTSS1LQ765P7 747 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 TRILQ7L0X0 811 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 C16orf62Q7Z3J2 963 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 OR52I1Q8NGK6 324 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 OR2L8Q8NGY9 312 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 GPA33Q99795 319 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 CNIH4Q9P003 139 aa14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 NUP210Q8TEM1 1887 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-201ENST00000319854 MPC2O95563 127 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 CXCL3P19876 107 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 TALDO1P37837 337 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 EVX1P49640 407 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 BCL2L15Q5TBC7 163 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 MEDAGQ5VYS4 303 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 FAM122CQ6P4D5 195 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 SHFQ7M4L6 423 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 SUN3Q8TAQ9 357 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 STARD5Q9NSY2 213 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 SLC17A4Q9Y2C5 497 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 GPR55Q9Y2T6 319 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 SEC16AO15027 2179 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 A8MVJ9 347 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 CFDP00746 253 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 SUZ12Q15022 739 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 SNAPC1Q16533 368 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 ASB18Q6ZVZ8 466 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 ZNF655Q8N720 491 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 OR4K5Q8NGD3 323 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 OR2M4Q96R27 311 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 EGLN3Q9H6Z9 239 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 TRPV4Q9HBA0 871 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 ZNF222Q9UK12 451 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 SLC13A4Q9UKG4 626 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 ASB4Q9Y574 426 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 FRYLO94915 3013 aa14.51□□□□□ -0.09
SHROOM1-201ENST00000319854 A0A1W2PQF6 199 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 CMPK1P30085 196 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 FUT5Q11128 374 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 EXOSC2Q13868 293 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 PRRT3Q5FWE3 981 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 PGBD2Q6P3X8 592 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 OR2L5Q8NG80 312 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 ATF6BQ99941 703 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 KCNN2Q9H2S1 579 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 CLDND1Q9NY35 253 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 PRKYO43930 277 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 HOXD4P09016 255 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 TFPIP10646 304 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 C1DQ13901 141 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 GPR176Q14439 515 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 ZMYND11Q15326 602 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 SF3A2Q15428 464 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 GHDCQ8N2G8 530 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 ZBTB44Q8NCP5 570 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 NUP43Q8NFH3 380 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 TMEM163Q8TC26 289 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 APOBEC4Q8WW27 367 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 MS4A3Q96HJ5 214 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 SORCS2Q96PQ0 1159 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 TIMM29Q9BSF4 260 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 ZNF624Q9P2J8 865 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 A4GNTQ9UNA3 340 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 RPL36Q9Y3U8 105 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 TRAV6A0A075B6T7 132 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 A0A1B0GVC2 190 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 A6NIN4 97 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 CASKO14936 926 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 PLRG1O43660 514 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 TPOP07202 933 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 MMP11P24347 488 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 SOX18P35713 384 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 PPP3R1P63098 170 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 SRSF5Q13243 272 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 PLK5Q496M5 336 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 TMEM201Q5SNT2 666 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 PRSS42Q7Z5A4 293 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 LAPTM4BQ86VI4 370 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 TBC1D19Q8N5T2 526 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 HMGB4Q8WW32 186 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 NCKAP1Q9Y2A7 1128 aa14.5□□□□□ -0.09
SHROOM1-201ENST00000319854 DVL2O14641 736 aa14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 EPPINO95925 133 aa14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 OSMP13725 252 aa14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 PRKACAP17612 351 aa14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 CSNK2A2P19784 350 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 TAS2R41P59536 307 aa14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 LGALSLQ3ZCW2 172 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 ZNF311Q5JNZ3 666 aa14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 GPR139Q6DWJ6 353 aa14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 TYW3Q6IPR3 259 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-201ENST00000319854 PRSS41Q7RTY9 318 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms