RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 LDB2O43679 373 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 CLDN19Q8N6F1 224 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 OR1E3Q8WZA6 343 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 UHRF1Q96T88 793 aaPredicted RBP14.65□□□□□ -0.06
HCFC1-201ENST00000310441 SLC17A6Q9P2U8 582 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 NLKQ9UBE8 527 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 CDC123O75794 336 aaPredicted RBP14.65□□□□□ -0.06
HCFC1-201ENST00000310441 NFYBP25208 207 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 GON7Q9BXV9 100 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 TP53BP1Q12888 1972 aaPredicted RBP14.65□□□□□ -0.06
HCFC1-201ENST00000310441 IGLV3-22A0A075B6J6 115 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 FXYD4P59646 89 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 UBE2G2P60604 165 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.65□□□□□ -0.06
HCFC1-201ENST00000310441 NIPSNAP3BQ9BS92 247 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 TMEM98Q9Y2Y6 226 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 GABARAPH6UMI1 98 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 NRP1O14786 923 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 KIAA0355O15063 1070 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 GABARAPO95166 117 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 FAM182AQ5T1J6 154 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 LPCAT3Q6P1A2 487 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 ASRGL1Q7L266 308 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 RSPRY1Q96DX4 576 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 PBX4Q9BYU1 374 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 RARRES3Q9UL19 164 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 H7C1Q1 480 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 USP2O75604 605 aaPredicted RBP14.65□□□□□ -0.06
HCFC1-201ENST00000310441 EIF4EP06730 217 aaKnown RBP14.65□□□□□ -0.06
HCFC1-201ENST00000310441 MMP12P39900 470 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 ABHD17BQ5VST6 288 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 INTS14Q96SY0 518 aa14.65□□□□□ -0.06
HCFC1-201ENST00000310441 APOBEC3GQ9HC16 384 aaKnown RBP14.65□□□□□ -0.06
HCFC1-201ENST00000310441 STSP08842 583 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 SPRYD7Q5W111 196 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 GPR83Q9NYM4 423 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 A0A1B0GV50 99 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 HTR3BO95264 441 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 TLE1Q04724 770 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.64□□□□□ -0.07
HCFC1-201ENST00000310441 L3HYPDHQ96EM0 354 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 RNF170Q96K19 258 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 PEX10O60683 326 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 PRKAR1BP31321 381 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 NPBWR1P48145 328 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 DEFB134Q4QY38 66 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 PLBD1Q6P4A8 553 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 OR52N2Q8NGI0 321 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 MIB2Q96AX9 1013 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 ECHDC3Q96DC8 303 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 THAP7Q9BT49 309 aaPredicted RBP14.64□□□□□ -0.07
HCFC1-201ENST00000310441 KLHL42Q9P2K6 505 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 STEAP1Q9UHE8 339 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 ZNF337Q9Y3M9 751 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 TRAV18A0A075B6X5 111 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 EPHA1P21709 976 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 IMPA1P29218 277 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 GRIN2CQ14957 1233 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 SERPINA11Q86U17 422 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 BOLLQ8N9W6 283 aaKnown RBP14.64□□□□□ -0.07
HCFC1-201ENST00000310441 FCRL3Q96P31 734 aaPredicted RBP14.64□□□□□ -0.07
HCFC1-201ENST00000310441 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 ANHXE9PGG2 379 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 BHLHE40O14503 412 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 RPL35P42766 123 aaKnown RBP14.64□□□□□ -0.07
HCFC1-201ENST00000310441 RBMS2Q15434 407 aaKnown RBP14.64□□□□□ -0.07
HCFC1-201ENST00000310441 KCNK6Q9Y257 313 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 TBX18O95935 607 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 DIO2Q92813 273 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 NUDT9Q9BW91 350 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 SFXN1Q9H9B4 322 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 KIF13BQ9NQT8 1826 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 CKAP5Q14008 2032 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 INPPL1O15357 1258 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 KCNK2O95069 426 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 SYNPRQ8TBG9 265 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 CD99L2Q8TCZ2 262 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 BRIX1Q8TDN6 353 aaKnown RBP14.64□□□□□ -0.07
HCFC1-201ENST00000310441 IL26Q9NPH9 171 aa14.64□□□□□ -0.07
HCFC1-201ENST00000310441 A0A0U1RQF3 1178 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 TCRBV7S3A2A0A539 114 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 FGF3P11487 239 aaPredicted RBP14.63□□□□□ -0.07
HCFC1-201ENST00000310441 BSCL2Q96G97 398 aaPredicted RBP14.63□□□□□ -0.07
HCFC1-201ENST00000310441 COG8Q96MW5 612 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 MYOTQ9UBF9 498 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 FABP1P07148 127 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 HNRNPA1P09651 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
HCFC1-201ENST00000310441 NUDT1P36639 197 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 OGDHQ02218 1023 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 PLA2G7Q13093 441 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 MOGSQ13724 837 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 C4orf17Q53FE4 359 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 OR4D6Q8NGJ1 314 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 OR5D16Q8NGK9 328 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 ANKRD60Q9BZ19 345 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 PELI2Q9HAT8 420 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 QPCTLQ9NXS2 382 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 ENPP5Q9UJA9 477 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 SALL4Q9UJQ4 1053 aa14.63□□□□□ -0.07
HCFC1-201ENST00000310441 RNASET2O00584 256 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms