RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 KEAP1Q14145 624 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 ZNF585AQ6P3V2 769 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PLBD1Q6P4A8 553 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 ZNF619Q8N2I2 560 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TMEM125Q96AQ2 219 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 MOAP1Q96BY2 351 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TCEAL2Q9H3H9 227 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 APMAPQ9HDC9 416 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 MEPEQ9NQ76 525 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 THAP10Q9P2Z0 257 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 MDFIC2A0A1B0GVS7 189 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 PLGP00747 810 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 KNG1P01042 644 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 PRKCAP17252 672 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 GIFP27352 417 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 PRSS3P35030 304 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 GMPRP36959 345 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 CAV2P51636 162 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 CLDN10P78369 228 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 USP53Q70EK8 1073 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 GAREM2Q75VX8 874 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 OR4D6Q8NGJ1 314 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 OR4C15Q8NGM1 316 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 SMPDL3AQ92484 453 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 FAM46AQ96IP4 442 aaKnown RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 RANBP9Q96S59 729 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 PLCXD1Q9NUJ7 323 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 MYEF2Q9P2K5 600 aaKnown RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 SLCO3A1Q9UIG8 710 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 ICKQ9UPZ9 632 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 UGT2A1Q9Y4X1 527 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 MYH4Q9Y623 1939 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 SLC35E2BP0CK96 405 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 SLC5A2P31639 672 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 RNF151Q2KHN1 245 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 ALKAL2Q6UX46 152 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 ZNF705AQ6ZN79 300 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 GDPGP1Q6ZNW5 385 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 CCDC116Q8IYX3 515 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 ALDH16A1Q8IZ83 802 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 TRAM1L1Q8N609 369 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 SMRP1Q8NCR6 262 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 SLAMF9Q96A28 289 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 ZNF597Q96LX8 424 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 MVB12BQ9H7P6 319 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 RDH14Q9HBH5 336 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 KLRF1Q9NZS2 232 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 SLC6A5Q9Y345 797 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 RNF215Q9Y6U7 377 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 IGLON5A6NGN9 336 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 KRBOX1C9JBD0 128 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 TNFRSF10BO14763 440 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 LILRB5O75023 590 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 HRH2P25021 359 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 RPL10P27635 214 aaKnown RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 CD70P32970 193 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 VSX2P58304 361 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 POU6F2P78424 691 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 SIM1P81133 766 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 CDK3Q00526 305 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 ID2Q02363 134 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 BEX5Q5H9J7 111 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 LIPJQ5W064 366 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 TMEM173Q86WV6 379 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 ZNF679Q8IYX0 411 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 HHATLQ9HCP6 504 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 RAB3DO95716 219 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 EGFP01133 1207 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 TNFSF8P32971 234 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 PREPP48147 710 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 OC90Q02509 493 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 EMX1Q04741 257 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 AVPI1Q5T686 147 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 FAM205BPQ63HN1 556 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 OR52E2Q8NGJ4 325 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 ELP4Q96EB1 424 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 DNAJA3Q96EY1 480 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 CPEB1Q9BZB8 566 aaKnown RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 KLHL21Q9UJP4 597 aa7.72□□□□□ -1.17
VPS41-202ENST00000310301 PTPRZ1P23471 2315 aaPredicted RBP7.72□□□□□ -1.17
VPS41-202ENST00000310301 FAM230AA0A1W2PPH8 454 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 E7ESA3 106 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 B4GALT2O60909 372 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 CSF1P09603 554 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 OSMP13725 252 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 GNB3P16520 340 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 TNFRSF1BP20333 461 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 STK19P49842 368 aaPredicted RBP7.71□□□□□ -1.17
VPS41-202ENST00000310301 RIDAP52758 137 aaKnown RBP7.71□□□□□ -1.17
VPS41-202ENST00000310301 RNF4P78317 190 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 KCNC3Q14003 757 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 MICAQ29983 383 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 ARHGAP40Q5TG30 622 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 Q6ZSR6 202 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 TEX26Q8N6G2 289 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 DCBLD2Q96PD2 775 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 NAA50Q9GZZ1 169 aaKnown RBP7.71□□□□□ -1.17
VPS41-202ENST00000310301 NOX3Q9HBY0 568 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 OARD1Q9Y530 152 aa7.71□□□□□ -1.17
VPS41-202ENST00000310301 PCDHGA2Q9Y5H1 932 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms