RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FPR3P25089 353 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 PGDP52209 483 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 LIMK1P53667 647 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 HHEXQ03014 270 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 CSTF1Q05048 431 aaKnown RBP10.74□□□□□ -0.69
PTPN2-201ENST00000309660 CCDC85BQ15834 202 aaPredicted RBP10.74□□□□□ -0.69
PTPN2-201ENST00000309660 DECR1Q16698 335 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 PYDC2Q56P42 97 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 PDZK1Q5T2W1 519 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 PRAMEF8Q5VWM4 474 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 PRAMEF7Q5VXH5 474 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 WDR88Q6ZMY6 472 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 MARCH9Q86YJ5 346 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 SLC22A18ASQ8N1D0 253 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 ZNF655Q8N720 491 aaPredicted RBP10.74□□□□□ -0.69
PTPN2-201ENST00000309660 AVL9Q8NBF6 648 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 DCLRE1CQ96SD1 692 aaKnown RBP10.74□□□□□ -0.69
PTPN2-201ENST00000309660 TPSD1Q9BZJ3 242 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 UBQLN3Q9H347 655 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 PIGUQ9H490 435 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 KCNE5Q9UJ90 142 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 SLCO1B1Q9Y6L6 691 aa10.74□□□□□ -0.69
PTPN2-201ENST00000309660 GPR75O95800 540 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 AGR2O95994 175 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 PTTG1O95997 202 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 CSF2P04141 144 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 ST6GAL1P15907 406 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 HTR2AP28223 471 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 MAT1AQ00266 395 aaKnown RBP10.73□□□□□ -0.69
PTPN2-201ENST00000309660 ARHGAP11BQ3KRB8 267 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 EIPR1Q53HC9 387 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 USP53Q70EK8 1073 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 ZNF619Q8N2I2 560 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 OR4N2Q8NGD1 307 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 OR52R1Q8NGF1 315 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 TMEM239Q8WW34 195 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 TOE1Q96GM8 510 aaKnown RBP10.73□□□□□ -0.69
PTPN2-201ENST00000309660 SDHCQ99643 169 aaPredicted RBP10.73□□□□□ -0.69
PTPN2-201ENST00000309660 S1PR5Q9H228 398 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 TRAPPC13A5PLN9 417 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 A6NCN8 305 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 C12orf71A8MTZ7 269 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 OR5F1O95221 314 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 THEGLP0DJG4 465 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 CPEP16870 476 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 MAKP20794 623 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 STAT5AP42229 794 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 ZNF136P52737 540 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 ADAM15Q13444 863 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 CEBPEQ15744 281 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 ZNF628Q5EBL2 1059 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 HEPHL1Q6MZM0 1159 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 GDPGP1Q6ZNW5 385 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 DGAT2L6Q6ZPD8 337 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 CDK20Q8IZL9 346 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 PEX11GQ96HA9 241 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 KRCC1Q9NPI7 259 aaPredicted RBP10.73□□□□□ -0.69
PTPN2-201ENST00000309660 SIDT1Q9NXL6 827 aaKnown RBP10.73□□□□□ -0.69
PTPN2-201ENST00000309660 PTGFRNQ9P2B2 879 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 C19orf53Q9UNZ5 99 aaPredicted RBP10.73□□□□□ -0.69
PTPN2-201ENST00000309660 EXOSC1Q9Y3B2 195 aaKnown RBP10.73□□□□□ -0.69
PTPN2-201ENST00000309660 CDH10Q9Y6N8 788 aa10.73□□□□□ -0.69
PTPN2-201ENST00000309660 A0A1W2PQ09 198 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 UNC119BA6NIH7 251 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 MSL3P1P0C860 447 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 DRD1P21728 446 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 MAGEA8P43361 318 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 PSPHP78330 225 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 STX4Q12846 297 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 RSBN1Q5VWQ0 802 aaPredicted RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 KLHL36Q8N4N3 616 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 SIRT6Q8N6T7 355 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 BAHD1Q8TBE0 780 aaPredicted RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 CNOT9Q92600 299 aaKnown RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 TM4SF19Q96DZ7 209 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 GAS2L1Q99501 681 aaPredicted RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 ISG20L2Q9H9L3 353 aaKnown RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 IL20Q9NYY1 176 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 POU2F3Q9UKI9 436 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 DVL2O14641 736 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 POU6F2P78424 691 aaPredicted RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 SELENBP1Q13228 472 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 DSG2Q14126 1118 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 PLK5Q496M5 336 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 CDRT4Q8N9R6 151 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 OR51L1Q8NGJ5 315 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 NEIL3Q8TAT5 605 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 SLC25A46Q96AG3 418 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 YIPF2Q9BWQ6 316 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 HCAR1Q9BXC0 346 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 GSDMCQ9BYG8 508 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 FBRSQ9HAH7 460 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 PILRAQ9UKJ1 303 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 PCOLCE2Q9UKZ9 415 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 FANCMQ8IYD8 2048 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 A0A075B6Q4 140 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 A0A0J9YY10 115 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 HRKO00198 91 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 DBIP07108 87 aaKnown RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 CLUP10909 449 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms