RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SNAP47Q5SQN1 464 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 LRRC25Q8N386 305 aaPredicted RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 OR2T33Q8NG76 320 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 ZFAND1Q8TCF1 268 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 GON7Q9BXV9 100 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 RNF32Q9H0A6 362 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 ANKRD19PQ9H560 264 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 TRIM45Q9H8W5 580 aaPredicted RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 CAPN10Q9HC96 672 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 CALML5Q9NZT1 146 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 TRIOO75962 3097 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 KLF4O43474 513 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 AKAP8O43823 692 aaKnown RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 LDB3O75112 727 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 REM1O75628 298 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 NDUFV2P19404 249 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 GALK2Q01415 458 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 CSTF1Q05048 431 aaKnown RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 GPM6BQ13491 265 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 RUNX2Q13950 521 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 EFR3AQ14156 821 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 CCDC85BQ15834 202 aaPredicted RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 KLHL12Q53G59 568 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 EOGTQ5NDL2 527 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 FBXO42Q6P3S6 717 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 TMEM91Q6ZNR0 172 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 CXXC5Q7LFL8 322 aaKnown RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 NR2C2APQ86WQ0 139 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 SMAD5Q99717 465 aaKnown RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 TMEM43Q9BTV4 400 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 TRAF4Q9BUZ4 470 aaPredicted RBP14.08□□□□□ -0.16
CSDC2-201ENST00000306149 NLKQ9UBE8 527 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 POLHQ9Y253 713 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 ALG5Q9Y673 324 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 SPEGQ15772 3267 aa14.08□□□□□ -0.16
CSDC2-201ENST00000306149 DOCK8Q8NF50 2099 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PRR19A6NJB7 356 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 C12orf71A8MTZ7 269 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 CHST10O43529 356 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 ADH1BP00325 375 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 HLA-DPB1P04440 258 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 SPTBP11277 2137 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 TBXA2RP21731 343 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 RFX3P48380 749 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 EVX1P49640 407 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 ZNF136P52737 540 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 SLC16A1P53985 500 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 CLDN20P56880 219 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 FXYD6P3P58550 94 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PPP2CBP62714 309 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PPP2CAP67775 309 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 CEBPEQ15744 281 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 FAM27D1Q5T7N8 215 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 ZNF322Q6U7Q0 402 aaPredicted RBP14.07□□□□□ -0.16
CSDC2-201ENST00000306149 IL20RBQ6UXL0 311 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PRSS41Q7RTY9 318 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PAQR7Q86WK9 346 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 YAF2Q8IY57 180 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 TMEM99Q8N816 258 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 TSACCQ96A04 125 aaPredicted RBP14.07□□□□□ -0.16
CSDC2-201ENST00000306149 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 NIPAL2Q9H841 368 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 MTHFD2LQ9H903 347 aaPredicted RBP14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PRKAG2Q9UGJ0 569 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 GSAPA4D1B5 854 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 SGK494L7N484 410 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PEX12O00623 359 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 LYRM1O43325 122 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 CTSVO60911 334 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 IGHA1P01876 353 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 APODP05090 189 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 MAKP20794 623 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 HTR2AP28223 471 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 HTR1FP30939 366 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 GDI1P31150 447 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 RAB25P57735 213 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 FAPQ12884 760 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 HEPHL1Q6MZM0 1159 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 ASPGQ86U10 573 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 YIPF7Q8N8F6 280 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 OR52N1Q8NH53 320 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 MS4A4EQ96PG1 132 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 SDF2Q99470 211 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 KCNJ15Q99712 375 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PPIL3Q9H2H8 161 aaKnown RBP14.07□□□□□ -0.16
CSDC2-201ENST00000306149 OR52D1Q9H346 318 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 MED17Q9NVC6 651 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 KCMF1Q9P0J7 381 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 PTGFRNQ9P2B2 879 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 ZNF624Q9P2J8 865 aaPredicted RBP14.07□□□□□ -0.16
CSDC2-201ENST00000306149 EXOGQ9Y2C4 368 aaKnown RBP14.07□□□□□ -0.16
CSDC2-201ENST00000306149 MRPS2Q9Y399 296 aaKnown RBP14.07□□□□□ -0.16
CSDC2-201ENST00000306149 CDH10Q9Y6N8 788 aa14.07□□□□□ -0.16
CSDC2-201ENST00000306149 OR6C70A6NIJ9 312 aa14.06□□□□□ -0.16
CSDC2-201ENST00000306149 C5orf67F2Z3F1 127 aa14.06□□□□□ -0.16
CSDC2-201ENST00000306149 MRPL3P09001 348 aaKnown RBP14.06□□□□□ -0.16
CSDC2-201ENST00000306149 GALP22466 123 aa14.06□□□□□ -0.16
CSDC2-201ENST00000306149 CDC73Q6P1J9 531 aa14.06□□□□□ -0.16
CSDC2-201ENST00000306149 MZT2AQ6P582 158 aa14.06□□□□□ -0.16
CSDC2-201ENST00000306149 ENPP7Q6UWV6 458 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms