RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TMEM203Q969S6 136 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TRIM43Q96BQ3 446 aaPredicted RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 ARMC5Q96C12 935 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 NUS1Q96E22 293 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CCDC120Q96HB5 630 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CMTM3Q96MX0 182 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 FOPNLQ96NB1 174 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 AMDHD1Q96NU7 426 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ORAI3Q9BRQ5 295 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 WACQ9BTA9 647 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 C1QTNF6Q9BXI9 259 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 GLIPR2Q9H4G4 154 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 KIR3DX1Q9H7L2 352 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 IL23AQ9NPF7 189 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 HINT3Q9NQE9 182 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 PRDM7Q9NQW5 492 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TEX10Q9NXF1 929 aaPredicted RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 CXXC1Q9P0U4 656 aaPredicted RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 THAP10Q9P2Z0 257 aaPredicted RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 RAB23Q9ULC3 237 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 NTNG1Q9Y2I2 539 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 MAP4K5Q9Y4K4 846 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 A0A1W2PRU2 124 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 LRIT2A6NDA9 550 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TLX2O43763 284 aaPredicted RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 TGM6O95932 706 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 LRG1P02750 347 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 IFNW1P05000 195 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 H1F0P07305 194 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 ACSM4P0C7M7 580 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 SLC2A2P11168 524 aaPredicted RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 FPR3P25089 353 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 PTH2RP49190 550 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 DCDP81605 110 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 FOXK2Q01167 660 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 GGTLC2Q14390 218 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 GINS1Q14691 196 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 HACD4Q5VWC8 232 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 SHEQ5VZ18 495 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 OLFML2AQ68BL7 652 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 NIPAL3Q6P499 406 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TMEM220Q6QAJ8 160 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 ADCK2Q7Z695 626 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 AMIGO1Q86WK6 493 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 LRRC28Q86X40 367 aaPredicted RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 HDDC3Q8N4P3 179 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TMEM99Q8N816 258 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 EXD3Q8N9H8 876 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 OR4K5Q8NGD3 323 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 OR9Q1Q8NGQ5 310 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 BRIX1Q8TDN6 353 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 SPRYD4Q8WW59 207 aaPredicted RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 SMPDL3AQ92484 453 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 CNOT9Q92600 299 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 MRGPRFQ96AM1 343 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 RSPRY1Q96DX4 576 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 PEX11GQ96HA9 241 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 DIRAS2Q96HU8 199 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 RADILQ96JH8 1075 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 RSPH9Q9H1X1 276 aaPredicted RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 FN3KQ9H479 309 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TRIM45Q9H8W5 580 aaPredicted RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 POLE3Q9NRF9 147 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 HAO2Q9NYQ3 351 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 SSR3Q9UNL2 185 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TMA7Q9Y2S6 64 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 EXOSC1Q9Y3B2 195 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 DYRK1BQ9Y463 629 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 C2orf92A0A1B0GVN3 265 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 IGLON5A6NGN9 336 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 SOCS6O14544 535 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 ZNF197O14709 1029 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 LCMT2O60294 686 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 PIP5K1CO60331 668 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 LDB3O75112 727 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 B3GALNT1O75752 331 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TCRBP04435 133 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 RPN2P04844 631 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 BCHEP06276 602 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 THBS1P07996 1170 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 RHOP08100 348 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 ATF1P18846 271 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 PEBP1P30086 187 aaKnown RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 MTNR1AP48039 350 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TAS2R38P59533 333 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 CSNK1G2P78368 415 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 TEAD2Q15562 447 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 NUP54Q7Z3B4 507 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 CDH24Q86UP0 819 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 UBE2J2Q8N2K1 259 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 PAQR4Q8N4S7 273 aaPredicted RBP5.05□□□□□ -1.6
VPS50-202ENST00000305866 SPICQ8N5J4 248 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 SPPL3Q8TCT6 385 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 MYLIPQ8WY64 445 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 HERVK_113Q902F9 699 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 BHMTQ93088 406 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 RAD51AP1Q96B01 352 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 CXorf58Q96LI9 332 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 CAMK1GQ96NX5 476 aa5.05□□□□□ -1.6
VPS50-202ENST00000305866 THAP7Q9BT49 309 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms