RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CPT1CQ8TCG5 803 aa22.33■■□□□ 1.17
HOXC9-201ENST00000303450 FAR1Q8WVX9 515 aa22.33■■□□□ 1.17
HOXC9-201ENST00000303450 OLAHQ9NV23 265 aa22.33■■□□□ 1.17
HOXC9-201ENST00000303450 ASF1BQ9NVP2 202 aa22.33■■□□□ 1.17
HOXC9-201ENST00000303450 ABCD2Q9UBJ2 740 aa22.33■■□□□ 1.17
HOXC9-201ENST00000303450 C17orf51A8MQB3 221 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 FAM220BPB1ANY3 271 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 GTPBP1O00178 669 aaKnown RBP22.32■■□□□ 1.16
HOXC9-201ENST00000303450 DBIP07108 87 aaKnown RBP22.32■■□□□ 1.16
HOXC9-201ENST00000303450 RFPL3SP0C7P2 107 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 AQP1P29972 269 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 PCGF2P35227 344 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 KRT73Q86Y46 540 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 DEFB107AQ8IZN7 70 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 TMEM251Q8N6I4 163 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 RBM15BQ8NDT2 890 aaKnown RBP22.32■■□□□ 1.16
HOXC9-201ENST00000303450 OR4K17Q8NGC6 315 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 OR52P1PQ8NH57 321 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.32■■□□□ 1.16
HOXC9-201ENST00000303450 C15orf41Q9Y2V0 281 aa22.32■■□□□ 1.16
HOXC9-201ENST00000303450 CBR3O75828 277 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 C1QL1O75973 258 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 ETS2P15036 469 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 RPS4Y1P22090 263 aaKnown RBP22.31■■□□□ 1.16
HOXC9-201ENST00000303450 GDF1P27539 372 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 FGFBP1Q14512 234 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 EIF3MQ7L2H7 374 aaKnown RBP22.31■■□□□ 1.16
HOXC9-201ENST00000303450 FAM109AQ8N4B1 249 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 WDR60Q8WVS4 1066 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 NR4A3Q92570 626 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 SH3YL1Q96HL8 342 aaPredicted RBP22.31■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF607Q96SK3 696 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 TSPAN10Q9H1Z9 355 aaPredicted RBP22.31■■□□□ 1.16
HOXC9-201ENST00000303450 DSN1Q9H410 356 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 ALG2Q9H553 416 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF703Q9H7S9 590 aaPredicted RBP22.31■■□□□ 1.16
HOXC9-201ENST00000303450 MED11Q9P086 117 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 TMEM181Q9P2C4 612 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF232Q9UNY5 417 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 USP22Q9UPT9 525 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 HCRTR2O43614 444 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 CSTAP01040 98 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 UBL4AP11441 157 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 MAGEA5P43359 124 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 EEFSECP57772 596 aaKnown RBP22.31■■□□□ 1.16
HOXC9-201ENST00000303450 KCNJ10P78508 379 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 TOMM20Q15388 145 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 INTS11Q5TA45 600 aaKnown RBP22.31■■□□□ 1.16
HOXC9-201ENST00000303450 RINLQ6ZS11 566 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 PRICKLE2Q7Z3G6 844 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 DTNBP1Q96EV8 351 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 SPATA5L1Q9BVQ7 753 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 FBXL2Q9UKC9 423 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 SLC35A3Q9Y2D2 325 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 IFT52Q9Y366 437 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 HRH3Q9Y5N1 445 aa22.31■■□□□ 1.16
HOXC9-201ENST00000303450 IGLV3-32A0A0A0MS00 114 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 ELOVL7A1L3X0 281 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 NPIPA5E9PKD4 350 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 GMFGO60234 142 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 DNAJA2O60884 412 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 CPOXP36551 454 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 ADH7P40394 386 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 LARS2Q15031 903 aaKnown RBP22.3■■□□□ 1.16
HOXC9-201ENST00000303450 LIN52Q52LA3 116 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 VRK2Q86Y07 508 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 MICU2Q8IYU8 434 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 CDRT15Q96T59 188 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 PTGES2Q9H7Z7 377 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 QPCTLQ9NXS2 382 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 NPIPA1Q9UND3 350 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 CARD8Q9Y2G2 431 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 GPC6Q9Y625 555 aaPredicted RBP22.3■■□□□ 1.16
HOXC9-201ENST00000303450 SVILO95425 2214 aa22.3■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF264O43296 627 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 SERPINB7O75635 380 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 TRAPPC6AO75865 159 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 PDE9AO76083 593 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 NID1P14543 1247 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 MST1P26927 711 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 MSX1P28360 303 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 GSK3BP49841 420 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 PCBP3P57721 371 aaKnown RBP22.29■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF117Q03924 483 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 VEZF1Q14119 521 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF311Q5JNZ3 666 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF324BQ6AW86 544 aaPredicted RBP22.29■■□□□ 1.16
HOXC9-201ENST00000303450 C6orf89Q6UWU4 347 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 CMIPQ8IY22 773 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 FADS6Q8N9I5 356 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 OR2M3Q8NG83 312 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 B4GALNT2Q8NHY0 566 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 KCTD14Q9BQ13 255 aaPredicted RBP22.29■■□□□ 1.16
HOXC9-201ENST00000303450 DEFB127Q9H1M4 99 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 UBQLN3Q9H347 655 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 ZDHHC11Q9H8X9 412 aa22.29■■□□□ 1.16
HOXC9-201ENST00000303450 GMPR2Q9P2T1 348 aaKnown RBP22.29■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF443Q9Y2A4 671 aaPredicted RBP22.29■■□□□ 1.16
HOXC9-201ENST00000303450 NCKAP5O14513 1909 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 CLDN24A6NM45 220 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms