RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ADAP00813 363 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 THP07101 528 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 AOAHP28039 575 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 CCR8P51685 355 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 SGSHP51688 502 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 AP1S2P56377 157 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 MTAPQ13126 283 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 RAB12Q6IQ22 244 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 BTN2A1Q7KYR7 527 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 SEC22AQ96IW7 307 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 SMG9Q9H0W8 520 aaKnown RBP13.49□□□□□ -0.25
CDT1-201ENST00000301019 CHST8Q9H2A9 424 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 OR51I1Q9H343 314 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 FAM86C1Q9NVL1 165 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 TMEM248Q9NWD8 314 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 C2orf42Q9NWW7 574 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 NOSIPQ9Y314 301 aaKnown RBP13.49□□□□□ -0.25
CDT1-201ENST00000301019 FAM96BQ9Y3D0 163 aa13.49□□□□□ -0.25
CDT1-201ENST00000301019 KLF2Q9Y5W3 355 aaPredicted RBP13.49□□□□□ -0.25
CDT1-201ENST00000301019 SIP14410 1827 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 A0A1W2PPE3 182 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 CARNS1A5YM72 827 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 OR6C76A6NM76 312 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 SCAMP1O15126 338 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 GPR32O75388 356 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 IGLV3-25P01717 112 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 KLK1P06870 262 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 UBXN11Q5T124 520 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 METAP1DQ6UB28 335 aaPredicted RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 LILRA3Q8N6C8 439 aaPredicted RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 HORMAD2Q8N7B1 307 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 ARIH2OSQ8N7S6 290 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 OR51L1Q8NGJ5 315 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 OR1S2Q8NGQ3 325 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 SLC38A5Q8WUX1 472 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 SPATA5L1Q9BVQ7 753 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 P2RY12Q9H244 342 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 FZD3Q9NPG1 666 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 ACSS1Q9NUB1 689 aaPredicted RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 MTMR11A4FU01 709 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 SLC28A2O43868 658 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 EIF1BO60739 113 aaKnown RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 ACP2P11117 423 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 HOXC13P31276 330 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 CCR7P32248 378 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 EIF1P41567 113 aaKnown RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 MAPK9P45984 424 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 SKP2Q13309 424 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 SP140Q13342 867 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 SYPL1Q16563 259 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 H3F3CQ6NXT2 135 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 JAZF1Q86VZ6 243 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 PAPOLGQ9BWT3 736 aaKnown RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 WDR13Q9H1Z4 485 aa13.48□□□□□ -0.25
CDT1-201ENST00000301019 MEPEQ9NQ76 525 aaPredicted RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 PRDM5Q9NQX1 630 aaPredicted RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 H2AFY2Q9P0M6 372 aaPredicted RBP13.48□□□□□ -0.25
CDT1-201ENST00000301019 FAM25EA8MYX2 175 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 UGT2B7P16662 529 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 ATF1P18846 271 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 PTX3P26022 381 aaPredicted RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 PXNP49023 591 aaPredicted RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 NOGQ13253 232 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 EOGTQ5NDL2 527 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 YOD1Q5VVQ6 348 aaPredicted RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 C12orf73Q69YU5 71 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 DPPA4Q7L190 304 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 KLHL36Q8N4N3 616 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 TEX26Q8N6G2 289 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 OR1M1Q8NGA1 313 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 PPCDCQ96CD2 204 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 TGIF2Q9GZN2 237 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 IL26Q9NPH9 171 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 C1GALT1Q9NS00 363 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 ZNF275Q9NSD4 429 aaPredicted RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 MYEF2Q9P2K5 600 aaKnown RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 PHF11Q9UIL8 331 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 LRRN3E7EW58 273 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 PSMB1P20618 241 aaKnown RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 CACNG1Q06432 222 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 OR7A5Q15622 319 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 CCL14Q16627 93 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 DUSP28Q4G0W2 176 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 METTL11BQ5VVY1 283 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 NAA40Q86UY6 237 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 CPOQ8IVL8 374 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 PAQR8Q8TEZ7 354 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 TLNRD1Q9H1K6 362 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 LRRN3Q9H3W5 708 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 EFCAB7A8K855 629 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 CCSO14618 274 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 HOXD9P28356 352 aaPredicted RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 CTGFP29279 349 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 CASP6P55212 293 aa13.47□□□□□ -0.25
CDT1-201ENST00000301019 SNTB1Q13884 538 aaKnown RBP13.47□□□□□ -0.25
CDT1-201ENST00000301019 CCINQ13939 588 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms