RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PCDH15Q96QU1 1955 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 CYR61O00622 381 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 IFI30P13284 250 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 MYL9P24844 172 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 SNRPD2P62316 118 aaKnown RBP20.4■□□□□ 0.86
TPM4-201ENST00000300933 SLC38A6Q8IZM9 456 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 OR8D4Q8NGM9 314 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 TMEM255BQ8WV15 326 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 SNAPC3Q92966 411 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 OPALINQ96PE5 141 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 MCHR1Q99705 422 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 ACOXLQ9NUZ1 547 aa20.4■□□□□ 0.86
TPM4-201ENST00000300933 A0A0A6YYC8 382 aaPredicted RBP20.39■□□□□ 0.85
TPM4-201ENST00000300933 I3L1I5 382 aaPredicted RBP20.39■□□□□ 0.85
TPM4-201ENST00000300933 FUT1P19526 365 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 IFNA8P32881 189 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 SCN1BQ07699 218 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 C12orf73Q69YU5 71 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 CDC73Q6P1J9 531 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 USP53Q70EK8 1073 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 TSTD1Q8NFU3 115 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 LRR1Q96L50 414 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 SDF2Q99470 211 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 TSSK6Q9BXA6 273 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 SLC22A4Q9H015 551 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 HHATLQ9HCP6 504 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 HCN3Q9P1Z3 774 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 LIPT1Q9Y234 373 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 A0A1W2PPC4 97 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 OR5K3A6NET4 321 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 MEN1O00255 615 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 CASC3O15234 703 aaKnown RBP20.39■□□□□ 0.85
TPM4-201ENST00000300933 WNT1P04628 370 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 RORCP51449 518 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 MAT1AQ00266 395 aaKnown RBP20.39■□□□□ 0.85
TPM4-201ENST00000300933 SNAPC1Q16533 368 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 ZNF628Q5EBL2 1059 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 C1orf94Q6P1W5 598 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 PLEKHM3Q6ZWE6 761 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 RRM2BQ7LG56 351 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 SHFQ7M4L6 423 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 OR5H6Q8NGV6 325 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 ORAI3Q9BRQ5 295 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 SLC25A19Q9HC21 320 aa20.39■□□□□ 0.85
TPM4-201ENST00000300933 C12orf71A8MTZ7 269 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 GALR3O60755 368 aaPredicted RBP20.38■□□□□ 0.85
TPM4-201ENST00000300933 SDC3O75056 442 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 ZNF91Q05481 1191 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 RUNX1T1Q06455 604 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 ZNF836Q6ZNA1 936 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 ZAR1Q86SH2 424 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 DIO2Q92813 273 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 KCNE5Q9UJ90 142 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 ZNF443Q9Y2A4 671 aaPredicted RBP20.38■□□□□ 0.85
TPM4-201ENST00000300933 WDFY4Q6ZS81 3184 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 GXYLT2A0PJZ3 443 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 B4DXG7 233 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 HRKO00198 91 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 MBTPS2O43462 519 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 PRKNO60260 465 aaPredicted RBP20.38■□□□□ 0.85
TPM4-201ENST00000300933 PSPHP78330 225 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 ARMC6Q6NXE6 501 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 C19orf48Q6RUI8 117 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 GLCCI1Q86VQ1 547 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 OOSP2Q86WS3 158 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 CA13Q8N1Q1 262 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 ARHGDIGQ99819 225 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 ABCB9Q9NP78 766 aa20.38■□□□□ 0.85
TPM4-201ENST00000300933 KIR2DS5A0A0G2JLQ3 304 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 A0A0G2JNG1 304 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 KIR2DS3K7RE56 304 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 EFR3AQ14156 821 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 KIR2DS5Q14953 304 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 UBXN2BQ14CS0 331 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 HEPHL1Q6MZM0 1159 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 CHRDL2Q6WN34 429 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 NRMQ8IXM6 262 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 ZNF614Q8N883 585 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 FRMD6Q96NE9 622 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 MAP3K3Q99759 626 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 CDCA4Q9BXL8 241 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 FOXQ1Q9C009 403 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 SLC7A7Q9UM01 511 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 DUXAA6NLW8 204 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 LRRTM2O43300 516 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 AKR7A2O43488 359 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 TMCC2O75069 709 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 ENDOUP21128 410 aaKnown RBP20.37■□□□□ 0.85
TPM4-201ENST00000300933 RPS5P46782 204 aaKnown RBP20.37■□□□□ 0.85
TPM4-201ENST00000300933 SLC30A6Q6NXT4 461 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 YIPF7Q8N8F6 280 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 OR8J1Q8NGP2 316 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 C9orf43Q8TAL5 461 aaPredicted RBP20.37■□□□□ 0.85
TPM4-201ENST00000300933 TAPBPLQ9BX59 468 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 TWSG1Q9GZX9 223 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 CMAHPQ9Y471 501 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 ENTPD2Q9Y5L3 495 aa20.37■□□□□ 0.85
TPM4-201ENST00000300933 SH3D21A4FU49 640 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 MPZL2O60487 215 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 GPR75O95800 540 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms