RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PHRF1Q9P1Y6 1649 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SDC1P18827 310 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RAB4AP20338 218 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CTSCP53634 463 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACBD4Q8NC06 268 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FNDC8Q8TC99 324 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 VAPAQ9P0L0 249 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 POLHQ9Y253 713 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MYH3P11055 1940 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RAB3AP20336 220 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SSTR2P30874 369 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ALDH3B1P43353 468 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SEC61A1P61619 476 aaKnown RBP12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ADARB1P78563 741 aaKnown RBP12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FAM198BQ6UWH4 519 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 C15orf39Q6ZRI6 1047 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 IL17RDQ8NFM7 739 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GCDHQ92947 438 aaPredicted RBP12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LRRC46Q96FV0 321 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TOE1Q96GM8 510 aaKnown RBP12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ARL5BQ96KC2 179 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR6C2Q9NZP2 312 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TESQ9UGI8 421 aaKnown RBP12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RPH3ALQ9UNE2 315 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CACNG2Q9Y698 323 aa12.77□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LOC102723532A0A0G2JNH3 316 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MAN2B1O00754 1011 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LILRB3O75022 631 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CNMDO75829 334 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NXPH3O95157 252 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ARAFP10398 606 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 UGT2B7P16662 529 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TCEAL1Q15170 157 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PAPD5Q8NDF8 572 aaKnown RBP12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 BEST4Q8NFU0 473 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NDUFB2O95178 105 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 AK1P00568 194 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SYPP08247 313 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ABOP16442 354 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HLA-DMAP28067 261 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GPR149Q86SP6 731 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TSPYL5Q86VY4 417 aaPredicted RBP12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ESX1Q8N693 406 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HSD17B8Q92506 261 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ADOQ96SZ5 270 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 USB1Q9BQ65 265 aaKnown RBP12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CAMK2AQ9UQM7 478 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TSPAN15O95858 294 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DDCP20711 480 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PROZP22891 400 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 WNT4P56705 351 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ACOT4Q8N9L9 421 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ELMOD3Q96FG2 381 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 EGLN3Q9H6Z9 239 aa12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RGPD8O14715 1765 aaPredicted RBP12.77□□□□□ -0.37
CHRFAM7A-201ENST00000299847 H7C1C5 153 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SULT2B1O00204 365 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 APBB3O95704 486 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 POLR2HP52434 150 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LCN6P62502 163 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ENTPD8Q5MY95 495 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CTSL3PQ5NE16 218 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 C3orf58Q8NDZ4 430 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 FAM83FQ8NEG4 500 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ACVR1CQ8NER5 493 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR51Q1Q8NH59 317 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 FIZ1Q96SL8 496 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RPS10P5Q9NQ39 176 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DNAJB11Q9UBS4 358 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MDFIC2A0A1B0GVS7 189 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HSD17B1P14061 328 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ACPPP15309 386 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CDK2P24941 298 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 BDKRB2P30411 391 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SELPLGQ14242 412 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NR0B2Q15466 257 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC22A6Q4U2R8 563 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLX4IPQ5VYV7 408 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 Q6ZPB1 254 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PARS2Q7L3T8 475 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 VWA5B2Q8N398 1253 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CNOT9Q92600 299 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SORT1Q99523 831 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PLEK2Q9NYT0 353 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 A0A0J9YY10 115 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HMGN2P05204 90 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SERPINA7P05543 415 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PABPC4LP0CB38 370 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GABRA2P47869 451 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CDK3Q00526 305 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 VASNQ6EMK4 673 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms