RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DPP7Q9UHL4 492 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 RNF13O43567 381 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 LDB3O75112 727 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 NOS3P29474 1203 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 ACVR1BP36896 505 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 ERVK-21P61565 698 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 ABATP80404 500 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 SGCGQ13326 291 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 DECR1Q16698 335 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 FIGNL1Q6PIW4 674 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 ZC3H14Q6PJT7 736 aaKnown RBP22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 THSD4Q6ZMP0 1018 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 TIMP4Q99727 224 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 CRISPLD2Q9H0B8 497 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 KLHL1Q9NR64 748 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 A0A1W2PQU0 124 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 FAM157BP0CG42 384 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 IFI30P13284 250 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 HTR2AP28223 471 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 GPLD1P80108 840 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 FAPQ12884 760 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 NRROSQ86YC3 692 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 OR51A7Q8NH64 312 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 SMARCD2Q92925 531 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 BADQ92934 168 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 FGF22Q9HCT0 170 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 ISYNA1Q9NPH2 558 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 CDH10Q9Y6N8 788 aa22.7■■□□□ 1.22
SPTSSA-201ENST00000298130 KLF4O43474 513 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 HCN1O60741 890 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 EIF4EP06730 217 aaKnown RBP22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 HCCSP53701 268 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 MTFR2Q6P444 385 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 SAMD12Q8N8I0 201 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 CITED4Q96RK1 184 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 CCDC86Q9H6F5 360 aaKnown RBP22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D29Q9UFV1 150 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 TRAV27A0A087WT01 109 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 A0A0B4J203 849 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 ERVH48-1M5A8F1 160 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 IGHA1P01876 353 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 PRKAR1BP31321 381 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 MZT2BQ6NZ67 158 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 OR4M1Q8NGD0 313 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 OR13C2Q8NGS9 318 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 FANK1Q8TC84 345 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 LCN9Q8WX39 176 aa22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 KIAA1143Q96AT1 154 aaPredicted RBP22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 EXOGQ9Y2C4 368 aaKnown RBP22.69■■□□□ 1.22
SPTSSA-201ENST00000298130 GON4LQ3T8J9 2241 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 LINC01553A4QN01 128 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 TSC22D2O75157 780 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 TRAPPC2P0DI81 140 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 TRAPPC2BP0DI82 140 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 ARSBP15848 533 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 TEAD1P28347 426 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 HTR2BP41595 481 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 ZNF136P52737 540 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 BTBD16Q32M84 506 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 GRHL3Q8TE85 626 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 C10orf90Q96M02 699 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 PRSS27Q9BQR3 290 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 TEX12Q9BXU0 123 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 MKRN2Q9H000 416 aaKnown RBP22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 USP36Q9P275 1121 aaKnown RBP22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 PRKAG2Q9UGJ0 569 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 TRAV6A0A075B6T7 132 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 H0Y8X5 98 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 P2RX6O15547 441 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 KRT74Q7RTS7 529 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 PRSS41Q7RTY9 318 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 ACBD7Q8N6N7 88 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 ZNF614Q8N883 585 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 C17orf47Q8NEP4 570 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 RASD1Q9Y272 281 aa22.68■■□□□ 1.22
SPTSSA-201ENST00000298130 DAPL1A0PJW8 107 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 GRXCR1A8MXD5 290 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 CMPK1P30085 196 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 IGFALSP35858 605 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 CCDC58Q4VC31 144 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 PEX5LQ8IYB4 626 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 LRRC25Q8N386 305 aaPredicted RBP22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 PLA2G2FQ9BZM2 168 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 KCNE5Q9UJ90 142 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 INMT-MINDY4F8WBC2 141 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 CHST10O43529 356 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 RFLNBQ8N5W9 214 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 OR51L1Q8NGJ5 315 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 IFT27Q9BW83 186 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 ENAMQ9NRM1 1142 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 SIDT1Q9NXL6 827 aaKnown RBP22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 BABAM2Q9NXR7 383 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 PCDHGB7Q9Y5F8 929 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 TRANK1O15050 2925 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 LRRC72A6NJI9 287 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 J3QLW9 94 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 EEF1E1O43324 174 aaKnown RBP22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 ZNF19P17023 458 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 HLA-DMAP28067 261 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 RUNX2Q13950 521 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms