RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 FLRT3Q9NZU0 649 aa21.06■□□□□ 0.96
PTX3-201ENST00000295927 MRTO4Q9UKD2 239 aaKnown RBP21.06■□□□□ 0.96
PTX3-201ENST00000295927 TRAPPC13A5PLN9 417 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 SERINC4A6NH21 518 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 TFAP2AP05549 437 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 OSMP13725 252 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 RBM48Q5RL73 367 aaKnown RBP21.05■□□□□ 0.96
PTX3-201ENST00000295927 TMEM205Q6UW68 189 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 ZNF730Q6ZMV8 503 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 CMIPQ8IY22 773 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 ZNF441Q8N8Z8 693 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 ACOT11Q8WXI4 607 aaPredicted RBP21.05■□□□□ 0.96
PTX3-201ENST00000295927 WDR77Q9BQA1 342 aaPredicted RBP21.05■□□□□ 0.96
PTX3-201ENST00000295927 ZNF559Q9BR84 538 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 SEMA4CQ9C0C4 833 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 HOXD1Q9GZZ0 328 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 B3GALT1Q9Y5Z6 326 aa21.05■□□□□ 0.96
PTX3-201ENST00000295927 TEX51A0A1B0GUA7 166 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 TO15178 435 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 CHMP24386 653 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 CRISP1P54107 249 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 NUP107P57740 925 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 TCF15Q12870 199 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 PTGES3Q15185 160 aaKnown RBP21.04■□□□□ 0.96
PTX3-201ENST00000295927 CSRP2Q16527 193 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 KLHL26Q53HC5 615 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 DCAF12Q5T6F0 453 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 PAPD4Q6PIY7 484 aaKnown RBP21.04■□□□□ 0.96
PTX3-201ENST00000295927 CPEB2Q7Z5Q1 589 aaKnown RBP21.04■□□□□ 0.96
PTX3-201ENST00000295927 SLCO6A1Q86UG4 719 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 APCDD1LQ8NCL9 501 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 TOR1AIP2Q8NFQ8 470 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 UBE2FQ969M7 185 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 PARD6AQ9NPB6 346 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 UBQLN4Q9NRR5 601 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 AASSQ9UDR5 926 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 ZNF223Q9UK11 482 aaPredicted RBP21.04■□□□□ 0.96
PTX3-201ENST00000295927 NXT1Q9UKK6 140 aaKnown RBP21.04■□□□□ 0.96
PTX3-201ENST00000295927 ADAM11O75078 769 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 CYC1P08574 325 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 ACAA2P42765 397 aaKnown RBP21.04■□□□□ 0.96
PTX3-201ENST00000295927 ISXQ2M1V0 245 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 FAM198BQ6UWH4 519 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 RAB11FIP2Q7L804 512 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 PRICKLE2Q7Z3G6 844 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 GALNT6Q8NCL4 622 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 TMEM255BQ8WV15 326 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 ADOQ96SZ5 270 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 GPA33Q99795 319 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 PRSS27Q9BQR3 290 aa21.04■□□□□ 0.96
PTX3-201ENST00000295927 ABCB7O75027 752 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 REM1O75628 298 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 UTS2O95399 124 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 CSTAP01040 98 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 RNF4P78317 190 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 MAD2L1BPQ15013 274 aaPredicted RBP21.03■□□□□ 0.96
PTX3-201ENST00000295927 FAM69BQ5VUD6 431 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 CDCP2Q5VXM1 449 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 CD300LDQ6UXZ3 194 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 RRM2BQ7LG56 351 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 APLFQ8IW19 511 aaPredicted RBP21.03■□□□□ 0.96
PTX3-201ENST00000295927 SLC35B4Q969S0 331 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 C8orf44Q96CB5 159 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 LPAR4Q99677 370 aa21.03■□□□□ 0.96
PTX3-201ENST00000295927 PPIEQ9UNP9 301 aaKnown RBP21.03■□□□□ 0.96
PTX3-201ENST00000295927 A0A087WXM4 84 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 ZAR1LA6NP61 321 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 TMX2-CTNND1H3BSU7 103 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 LYPD3O95274 346 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 SOX14O95416 240 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 IGFBP1P08833 259 aaPredicted RBP21.02■□□□□ 0.96
PTX3-201ENST00000295927 CRHBPP24387 322 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 POU1F1P28069 291 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 IFNGR2P38484 337 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 RAB15P59190 212 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 COX10Q12887 443 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 NDUFAF6Q330K2 333 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 TMEM236Q5W0B7 351 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 ZNF517Q6ZMY9 492 aaPredicted RBP21.02■□□□□ 0.96
PTX3-201ENST00000295927 ZNF550Q7Z398 422 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 MEX3DQ86XN8 651 aaKnown RBP21.02■□□□□ 0.96
PTX3-201ENST00000295927 ENTHD1Q8IYW4 607 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 ZNF527Q8NB42 609 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 C17orf47Q8NEP4 570 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 FAM81AQ8TBF8 368 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 HSPBAP1Q96EW2 488 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 LIN28AQ9H9Z2 209 aaKnown RBP21.02■□□□□ 0.96
PTX3-201ENST00000295927 TMEM27Q9HBJ8 222 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 RASSF1Q9NS23 344 aa21.02■□□□□ 0.96
PTX3-201ENST00000295927 C19orf25Q9UFG5 118 aaPredicted RBP21.02■□□□□ 0.96
PTX3-201ENST00000295927 PMS2P1A4D2B8 440 aa21.02■□□□□ 0.95
PTX3-201ENST00000295927 C9J4A7 227 aa21.02■□□□□ 0.95
PTX3-201ENST00000295927 TP53P04637 393 aaPredicted RBP21.02■□□□□ 0.95
PTX3-201ENST00000295927 RPL5P46777 297 aaKnown RBP21.02■□□□□ 0.95
PTX3-201ENST00000295927 HLCSP50747 726 aa21.02■□□□□ 0.95
PTX3-201ENST00000295927 TUBA4AP68366 448 aa21.02■□□□□ 0.95
PTX3-201ENST00000295927 DESI1Q6ICB0 168 aa21.02■□□□□ 0.95
PTX3-201ENST00000295927 ZNF613Q6PF04 617 aa21.02■□□□□ 0.95
PTX3-201ENST00000295927 HSDL2Q6YN16 418 aa21.02■□□□□ 0.95
PTX3-201ENST00000295927 MBOAT2Q6ZWT7 520 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms