RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DUSP2Q05923 314 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 TRA2AQ13595 282 aaKnown RBP eCLIP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 LASP1Q14847 261 aaKnown RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 ZNF628Q5EBL2 1059 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 DEF8Q6ZN54 512 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 TTLL10Q6ZVT0 673 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 LYSMD2Q8IV50 215 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 NAXDQ8IW45 347 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 OR4N5Q8IXE1 308 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 OR51Q1Q8NH59 317 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 OR1L3Q8NH93 324 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 WDR36Q8NI36 951 aaKnown RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 ADAMTS15Q8TE58 950 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 XAGE5Q8WWM1 108 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 ANKRD9Q96BM1 317 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 ZNF501Q96CX3 271 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 PEX11GQ96HA9 241 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 TMEM80Q96HE8 168 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 GFM1Q96RP9 751 aaKnown RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 MND1Q9BWT6 205 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 PINK1Q9BXM7 581 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 POLDIP3Q9BY77 421 aaKnown RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 HCN3Q9P1Z3 774 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 C19orf53Q9UNZ5 99 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 MMACHCQ9Y4U1 282 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 SCN3AQ9NY46 2000 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 A0A0G2JPF8 293 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 LOC100506127A0A0U1RQW1 187 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 A0A1W2PQM1 296 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 HNRNPCL2B2RXH8 293 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 HNRNPCL3B7ZW38 293 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 FAM227AF5H4B4 570 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 SYT5O00445 386 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 ZNF749O43361 778 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 COQ9O75208 318 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 ENTPD6O75354 484 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 PTTG1O95997 202 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 HNRNPCL4P0DMR1 293 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 OR12D1P0DN82 309 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 GSTM3P21266 225 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 FUT4P22083 530 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 ALAS2P22557 587 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 POU1F1P28069 291 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 GALNSP34059 522 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 DBX2Q6ZNG2 339 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 PIP4P1Q86T03 277 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 FAM26EQ8N5C1 309 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 KAT2AQ92830 837 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 PRRC1Q96M27 445 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 RSPO3Q9BXY4 272 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 SLC7A5P2Q9GIP4 190 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 TRIM45Q9H8W5 580 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 CRNNQ9UBG3 495 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 A0A1B0GX78 115 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 IRGMA1A4Y4 181 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 LOC110117498-PIK3R3F6TDL0 507 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 M0R129 80 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 NME6O75414 186 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 LDOC1O95751 146 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 LGI1O95970 557 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 HBQ1P09105 142 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 CSRP1P21291 193 aaKnown RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 IGLV3-21P80748 117 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 MAP4K2Q12851 820 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 CBX3Q13185 183 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 DSG2Q14126 1118 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 MED22Q15528 200 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 SYPL1Q16563 259 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 TSTQ16762 297 aaKnown RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 ENTPD8Q5MY95 495 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 CDC73Q6P1J9 531 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 ZNF574Q6ZN55 896 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 TMEM52Q8NDY8 209 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 PROKR2Q8NFJ6 384 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 OR7G2Q8NG99 324 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 OR4D11Q8NGI4 311 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 SLC7A13Q8TCU3 470 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 PIK3R3Q92569 461 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 ITFG2Q969R8 447 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 OPALINQ96PE5 141 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 OR5M11Q96RB7 305 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 CHCHD6Q9BRQ6 235 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 CENPOQ9BU64 300 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 FNDC11Q9BVV2 318 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 C6orf62Q9GZU0 229 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 SYNDIG1Q9H7V2 258 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 ZNF304Q9HCX3 659 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 SEC14L4Q9UDX3 406 aa15.59■□□□□ 0.09
CPSF4-201ENST00000292476 ATXN7L1Q9ULK2 861 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 ARID1BQ8NFD5 2236 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-201ENST00000292476 PCNX2A6NKB5 2137 aa15.58■□□□□ 0.09
CPSF4-201ENST00000292476 IGHV5-10-1A0A0J9YXX1 117 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 PRAMEF27A3QJZ7 478 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 TP53P04637 393 aaPredicted RBP15.58■□□□□ 0.08
CPSF4-201ENST00000292476 HSMCR30P0CW71 290 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 GCGRP47871 477 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 LTB4RQ15722 352 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 PRICKLE4Q2TBC4 344 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 MFSD12Q6NUT3 480 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 SLC22A16Q86VW1 577 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms