RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SIDT1Q9NXL6 827 aaKnown RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 RPH3ALQ9UNE2 315 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 H0Y8G0 127 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF701M0R085 212 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 PRAMEF11O60813 436 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 DRD5P21918 477 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 PTGER4P35408 488 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 TAP2Q03519 686 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GPR176Q14439 515 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF791Q3KP31 576 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF678Q5SXM1 525 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 OGFOD3Q6PK18 319 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 C15orf52Q6ZUT6 534 aaKnown RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 TSPYL5Q86VY4 417 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 OR4K13Q8NH42 304 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 CLEC4CQ8WTT0 213 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 INSL6Q9Y581 213 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 TEX264Q9Y6I9 313 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 KIF13AQ9H1H9 1805 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 MAGEB4O15481 346 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 RAP2BP61225 183 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 CMTM2Q8TAZ6 248 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 NPRL2Q8WTW4 380 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 LURAP1Q96LR2 239 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SFXN2Q96NB2 322 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SLC23A2Q9UGH3 650 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 COL5A2P05997 1499 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 MIA3Q5JRA6 1907 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 UPK1BO75841 260 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GABRR1P24046 479 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SLC6A8P48029 635 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SUOXP51687 545 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 NKX2-5P52952 324 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 DLX5P56178 289 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF705AQ6ZN79 300 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 CCDC116Q8IYX3 515 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 BRIX1Q8TDN6 353 aaKnown RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 FGGYQ96C11 551 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF486Q96H40 463 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SACM1LQ9NTJ5 587 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 QPCTLQ9NXS2 382 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GJD2Q9UKL4 321 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 CDK5RAP2Q96SN8 1893 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ITGB2P05107 769 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 CD79AP11912 226 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GALEQ14376 348 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 YIF1BQ5BJH7 314 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM31Q5JXX7 168 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ABHD17BQ5VST6 288 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 PLPP5Q8NEB5 264 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 OR5W2Q8NH69 310 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF689Q96CS4 500 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 MCOLN1Q9GZU1 580 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 EGFP01133 1207 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 BMP4P12644 408 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 GSK3AP49840 483 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 BMXP51813 675 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 RAC1P63000 192 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 METTL2BQ6P1Q9 378 aaKnown RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 FAM217AQ8IXS0 508 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 FAM58AQ8N1B3 248 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 RHEBL1Q8TAI7 183 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 IL1F10Q8WWZ1 152 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SORCS2Q96PQ0 1159 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 INTS14Q96SY0 518 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 OR11A1Q9GZK7 315 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 CHRDQ9H2X0 955 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 PPP1R2P9O14990 202 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 STSP08842 583 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 NFYBP25208 207 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 PHYHD1Q5SRE7 291 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 GAREM2Q75VX8 874 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 DTX3Q8N9I9 347 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 MAP3K3Q99759 626 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 WDR6Q9NNW5 1121 aaKnown RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SPATA31D1Q6ZQQ2 1576 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 HNF4GQ14541 408 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 C6orf136Q5SQH8 315 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SERPINA12Q8IW75 414 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 CLDN19Q8N6F1 224 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 LINC01599Q8WXQ3 324 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM59Q9BXS4 323 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 LILRB3O75022 631 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 NNATQ16517 81 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 ZFP41Q8N8Y5 198 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 KDF1Q8NAX2 398 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 OR5D14Q8NGL3 314 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 FZD1Q9UP38 647 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 KCNK5O95279 499 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 HOXA10P31260 410 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 OTX2P32243 289 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 AAK1Q2M2I8 961 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SEMA6DQ8NFY4 1073 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 OR11L1Q8NGX0 322 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 OR4Q3Q8NH05 313 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 DPH2Q9BQC3 489 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms