RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 FBLL1A6NHQ2 334 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 LRRC3CA6NJW4 275 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 A8MU76 341 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 HHLA1C9JL84 531 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 F8VVB4 439 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 F8VWA3 439 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 NPIPA3F8WFD2 350 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 I6L893 689 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 NDUFAB1O14561 156 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 GPR171O14626 319 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 SLC16A5O15375 505 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 STX7O15400 261 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 COCHO43405 550 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 SLC37A4O43826 429 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 NDUFA7O95182 113 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 LYPLA2O95372 231 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 CLDN7O95471 211 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 FCER2P06734 321 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ALOX5P09917 674 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 HOXB8P17481 243 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 LAP3P28838 519 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 SSTR1P30872 391 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 YWHABP31946 246 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 CBX5P45973 191 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 HSPA13P48723 471 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 NR0B1P51843 470 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 RWDD2BP57060 319 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 PRPS1P60891 318 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 EEF1A1P68104 462 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 ZXDBP98169 803 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 MAT1AQ00266 395 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 PSG6Q00889 435 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 CFHR3Q02985 330 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 EEF1A2Q05639 463 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 CRYZQ08257 329 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 SLC10A2Q12908 348 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 GAGE2BQ13066 116 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 STX3Q13277 289 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ORC2Q13416 577 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 ART3Q13508 389 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 VEZF1Q14119 521 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ITIH4Q14624 930 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 TAF13Q15543 124 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 VAMP3Q15836 100 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 CALCRLQ16602 461 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 GAGE2EQ4V326 116 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 TCEAL5Q5H9L2 206 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 EARS2Q5JPH6 523 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 CLVS2Q5SYC1 327 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ZNF658Q5TYW1 1059 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 EEF1A1P5Q5VTE0 462 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 NADSYN1Q6IA69 706 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 GAGE2AQ6NT46 116 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 C1orf94Q6P1W5 598 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 FAM171BQ6P995 826 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 RFWD3Q6PCD5 774 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 KCNIP4Q6PIL6 250 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 NAPRTQ6XQN6 538 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 LEKR1Q6ZMV7 388 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 NCCRP1Q6ZVX7 275 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 Q6ZWC4 215 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 GPR141Q7Z602 305 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 TMC8Q8IU68 726 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 NUDCD3Q8IVD9 361 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 SPATA6LQ8N4H0 392 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ALLCQ8N6M5 410 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 BMPERQ8N8U9 685 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 SMYD1Q8NB12 490 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 SLC38A9Q8NBW4 561 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 OR5T1Q8NG75 326 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 OR10Q1Q8NGQ4 319 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ENKURQ8TC29 256 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 CAPSLQ8WWF8 208 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 PYCR2Q96C36 320 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 CEP170P1Q96L14 293 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 HSD17B14Q9BPX1 270 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 TUBGCP2Q9BSJ2 902 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 CCM2Q9BSQ5 444 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 LMF2Q9BU23 707 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 SEMA4CQ9C0C4 833 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 GANQ9H2C0 597 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 FOXP1Q9H334 677 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 ACTL8Q9H568 366 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 DHX33Q9H6R0 707 aaKnown RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 UBE2ZQ9H832 354 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 GSN-AS1Q9NRJ2 163 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 PHPT1Q9NRX4 125 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 NLGN3Q9NZ94 848 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 PTTG3PQ9NZH4 202 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ADA2Q9NZK5 511 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 GAGE2DQ9UEU5 116 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 ZNF229Q9UJW7 825 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 TTC7AQ9ULT0 858 aaPredicted RBP4.15□□□□□ -1.75
CD44-202ENST00000278385 RPH3ALQ9UNE2 315 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 B3GALT5Q9Y2C3 310 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 POFUT2Q9Y2G5 429 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.15□□□□□ -1.75
CD44-202ENST00000278385 TNFRSF18Q9Y5U5 241 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 STON1Q9Y6Q2 735 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms