RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZNF425Q6IV72 752 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF620Q6ZNG0 422 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 GATAD2AQ86YP4 633 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 GID4Q8IVV7 300 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 OR52E1Q8NGJ3 308 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 LILRB4Q8NHJ6 448 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ADAMTS15Q8TE58 950 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 GIMAP5Q96F15 307 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 FAM46AQ96IP4 442 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 LOXL4Q96JB6 756 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 HSPA12BQ96MM6 686 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF649Q9BS31 505 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 RSPH9Q9H1X1 276 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 FN3KQ9H479 309 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 OSGEPL1Q9H4B0 414 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 MBNL1Q9NR56 388 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 CNIH4Q9P003 139 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 H2AFY2Q9P0M6 372 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF232Q9UNY5 417 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 KCNE3Q9Y6H6 103 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 CPSF4LA6NMK7 179 aaKnown RBP12.02□□□□□ -0.49
C9orf3-201ENST00000277198 FAM25AB3EWG3 89 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 FAM25CB3EWG5 89 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 FAM25GB3EWG6 89 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 C4orf51C9J302 202 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 PRKRAO75569 313 aaKnown RBP12.02□□□□□ -0.49
C9orf3-201ENST00000277198 PRKAR1AP10644 381 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 CD53P19397 219 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 MC3RP41968 323 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 DAB2P98082 770 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF155Q12901 538 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-201ENST00000277198 IRF4Q15306 451 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 EIPR1Q53HC9 387 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 C18orf63Q68DL7 685 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 CDC73Q6P1J9 531 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 PLET1Q6UQ28 207 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 PLEKHM3Q6ZWE6 761 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 VRK2Q86Y07 508 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 TCTE3Q8IZS6 198 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 ATP6V1C2Q8NEY4 427 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 ATF6BQ99941 703 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 GPR174Q9BXC1 333 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 MMP28Q9H239 520 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 KCNN2Q9H2S1 579 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 XKR8Q9H6D3 395 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 KIR3DX1Q9H7L2 352 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 CTPS2Q9NRF8 586 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 TOR4AQ9NXH8 423 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 KLF15Q9UIH9 416 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 YARS2Q9Y2Z4 477 aaKnown RBP12.02□□□□□ -0.49
C9orf3-201ENST00000277198 CHST2Q9Y4C5 530 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 OR1A2Q9Y585 309 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 PLXND1Q9Y4D7 1925 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 CACNA1AO00555 2505 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 NCOR2Q9Y618 2525 aa12.02□□□□□ -0.49
C9orf3-201ENST00000277198 SGK494L7N484 410 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 TFECO14948 347 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 THBS1P07996 1170 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF806P0C7X5 589 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 GNSP15586 552 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 ACSL1P33121 698 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 TRHRP34981 398 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 KIR2DL3P43628 341 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 MAP2K3P46734 347 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 DUSP2Q05923 314 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 CNIH2Q6PI25 160 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 OLIG3Q7RTU3 272 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 GDF7Q7Z4P5 450 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 LHFPL3Q86UP9 236 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 NOXA1Q86UR1 476 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 GALNT12Q8IXK2 581 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 RNF113BQ8IZP6 322 aaKnown RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 Q8N402 240 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 Q8N9G6 341 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 OR9A2Q8NGT5 310 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 OR4Q3Q8NH05 313 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 NEIL3Q8TAT5 605 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 BRIX1Q8TDN6 353 aaKnown RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 GAL3ST3Q96A11 431 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 SLC41A3Q96GZ6 507 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 MS4A4EQ96PG1 132 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 UBL7Q96S82 380 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 MCHR1Q99705 422 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 KCNJ15Q99712 375 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 QRSL1Q9H0R6 528 aaKnown RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 WSB2Q9NYS7 404 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 OR6C2Q9NZP2 312 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 GPR55Q9Y2T6 319 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 PCDHGA5Q9Y5G8 931 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 COLEC10Q9Y6Z7 277 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 LNP1A1A4G5 178 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 J3QRE1 110 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 GABRPO00591 440 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 MID1O15344 667 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 RNGTTO60942 597 aaKnown RBP12.01□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF217O75362 1048 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 CEACAM5P06731 702 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 CERS1P27544 350 aa12.01□□□□□ -0.49
C9orf3-201ENST00000277198 CAPZA2P47755 286 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms