RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 KDM4DQ6B0I6 523 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 QSOX2Q6ZRP7 698 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 LANCL3Q6ZV70 420 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 OLIG3Q7RTU3 272 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 OR52R1Q8NGF1 315 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 DOK4Q8TEW6 326 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 CYGBQ8WWM9 190 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 PMM1Q92871 262 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 MIB2Q96AX9 1013 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 SDF2Q99470 211 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 NECTIN3Q9NQS3 549 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 SCOCQ9UIL1 159 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 TESMINQ9Y4I5 508 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 PCDHGB5Q9Y5G0 923 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 CPAMD8Q8IZJ3 1885 aa22.67■■□□□ 1.22
SSBP4-201ENST00000270061 HS6ST1O60243 411 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 NKX2-2O95096 273 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ZIC2O95409 532 aaPredicted RBP22.66■■□□□ 1.22
SSBP4-201ENST00000270061 SERPINA7P05543 415 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ICAM2P13598 275 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 MAOAP21397 527 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 LIMS1P48059 325 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 DUSP8Q13202 625 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 TTC23Q5W5X9 447 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 FAHD1Q6P587 224 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 FRRS1Q6ZNA5 592 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 CPEB2Q7Z5Q1 589 aaKnown RBP22.66■■□□□ 1.22
SSBP4-201ENST00000270061 LMF2Q9BU23 707 aaKnown RBP22.66■■□□□ 1.22
SSBP4-201ENST00000270061 SAP130Q9H0E3 1048 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 TOR3AQ9H497 397 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 TRIM45Q9H8W5 580 aaPredicted RBP22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ACER3Q9NUN7 267 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ORC6Q9Y5N6 252 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ESPL1Q14674 2120 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 DAPP51397 102 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 SPIBQ01892 262 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 FUT7Q11130 342 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 PLEKHN1Q494U1 663 aaPredicted RBP22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ANKRD34AQ69YU3 496 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 TYW3Q6IPR3 259 aaKnown RBP22.66■■□□□ 1.22
SSBP4-201ENST00000270061 DHRS4L2Q6PKH6 230 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 IGFL2Q6UWQ7 119 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ISLR2Q6UXK2 745 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ZNF350Q9GZX5 532 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 ACAD8Q9UKU7 415 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 SLC9A8Q9Y2E8 581 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 IFT52Q9Y366 437 aa22.66■■□□□ 1.22
SSBP4-201ENST00000270061 J3KTA2 159 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 FCMRO60667 390 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 EPPINO95925 133 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 GUSBP08236 651 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 GNAO1P09471 354 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 PRKAR1BP31321 381 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 YAP1P46937 504 aaKnown RBP22.65■■□□□ 1.22
SSBP4-201ENST00000270061 EMDP50402 254 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 MYBPC1Q00872 1141 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 NSDHLQ15738 373 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 ZNF311Q5JNZ3 666 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 KRT80Q6KB66 452 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 TMEM154Q6P9G4 183 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 CYP4Z1Q86W10 505 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 BRIX1Q8TDN6 353 aaKnown RBP22.65■■□□□ 1.22
SSBP4-201ENST00000270061 DHRS1Q96LJ7 313 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 IMMP1LQ96LU5 166 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 MBOAT4Q96T53 435 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 PSD2Q9BQI7 771 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 PNPLA3Q9NST1 481 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 FAM118AQ9NWS6 357 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 WDR45Q9Y484 360 aa22.65■■□□□ 1.22
SSBP4-201ENST00000270061 IGKV3D-11A0A0A0MRZ8 115 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 IGHV3-20A0A0C4DH32 117 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 TNFAIP8O95379 198 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 IGFBP5P24593 272 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 CDH12P55289 794 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 RHAGQ02094 409 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 ZIK1Q3SY52 487 aaPredicted RBP22.64■■□□□ 1.22
SSBP4-201ENST00000270061 DCST2Q5T1A1 773 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 LINC00696Q6ZRV3 163 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 Q6ZS92 163 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 ANKRD37Q7Z713 158 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 ATCAYQ86WG3 371 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 COX18Q8N8Q8 333 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 PLPP5Q8NEB5 264 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 OR4D11Q8NGI4 311 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 GIPC3Q8TF64 312 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 PTCHD1Q96NR3 888 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 WDR77Q9BQA1 342 aaPredicted RBP22.64■■□□□ 1.22
SSBP4-201ENST00000270061 ZNF696Q9H7X3 374 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 POLE3Q9NRF9 147 aa22.64■■□□□ 1.22
SSBP4-201ENST00000270061 SEC24DO94855 1032 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-201ENST00000270061 CELA2AP08217 269 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 LAPTM4AQ15012 233 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 INPP5JQ15735 1006 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-201ENST00000270061 MICAQ29983 383 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 PSMF1Q92530 271 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 ZG16BQ96DA0 208 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 FBXL20Q96IG2 436 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 LMF1Q96S06 567 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 FOLH1BQ9HBA9 442 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 ASH1LQ9NR48 2969 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms