RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SLC18B1Q6NT16 456 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 SAMD12Q8N8I0 201 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ZMYND19Q96E35 227 aaPredicted RBP12.84□□□□□ -0.35
NPC1-201ENST00000269228 STOML2Q9UJZ1 356 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ZNF221Q9UK13 617 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ABCG2Q9UNQ0 655 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 M0R129 80 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 TUBB1Q9H4B7 451 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 GLIPR2Q9H4G4 154 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 SLC7A11Q9UPY5 501 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ANKRD28O15084 1053 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 HSPA12AO43301 675 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 MAOAP21397 527 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 GNG2P59768 71 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ERVK-25P63136 954 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 OR1Q1Q15612 314 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 IQCF2Q8IXL9 164 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 SLC38A5Q8WUX1 472 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 CHTF18Q8WVB6 975 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 TMEM121BQ9BXQ6 578 aaPredicted RBP12.84□□□□□ -0.35
NPC1-201ENST00000269228 HDHD5Q9BXW7 423 aa12.84□□□□□ -0.35
NPC1-201ENST00000269228 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.84□□□□□ -0.35
NPC1-201ENST00000269228 QSER1Q2KHR3 1735 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 PLPP1O14494 284 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 GABRG2P18507 467 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 ARPC4P59998 168 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 PRAMEF20Q5VT98 475 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 GARNL3Q5VVW2 1013 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 PODNL1Q6PEZ8 512 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 TMPRSS12Q86WS5 348 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 SLITRK4Q8IW52 837 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 GALNT6Q8NCL4 622 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 SDR9C7Q8NEX9 313 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 SLC22A4Q9H015 551 aa12.83□□□□□ -0.35
NPC1-201ENST00000269228 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.36
NPC1-201ENST00000269228 NKAPLQ5M9Q1 402 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 ISOC1Q96CN7 298 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 AMDHD1Q96NU7 426 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 WACQ9BTA9 647 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 LMF2Q9BU23 707 aaKnown RBP12.83□□□□□ -0.36
NPC1-201ENST00000269228 CHIAQ9BZP6 476 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 GMPR2Q9P2T1 348 aaKnown RBP12.83□□□□□ -0.36
NPC1-201ENST00000269228 ZNF639Q9UID6 485 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 CMAHPQ9Y471 501 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 SH3D21A4FU49 640 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 A6NLC8 198 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 DENRO43583 198 aaKnown RBP12.83□□□□□ -0.36
NPC1-201ENST00000269228 ICAM2P13598 275 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 S100A1P23297 94 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 MYF6P23409 242 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 SMAD2Q15796 467 aaKnown RBP12.83□□□□□ -0.36
NPC1-201ENST00000269228 AKIRIN2Q53H80 203 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 SLC48A1Q6P1K1 146 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 TUBA3EQ6PEY2 450 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 HAVCR1Q96D42 359 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 AGPAT4Q9NRZ5 378 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 KNTC1P50748 2209 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 TRAV27A0A087WT01 109 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 J3KTA2 159 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 MALLQ13021 153 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 TRAM1Q15629 374 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 WBP2NLQ6ICG8 309 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
NPC1-201ENST00000269228 TCRBV3S1A0A5B6 114 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 CTNSO60931 367 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 OLFM2O95897 454 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 PEX11BO96011 259 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 CEACAM5P06731 702 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 TCN2P20062 427 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 RNF215Q9Y6U7 377 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 ARID1BQ8NFD5 2236 aaPredicted RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 LRIT2A6NDA9 550 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 C12orf71A8MTZ7 269 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 PCDH17O14917 1159 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 PABPC4LP0CB38 370 aaKnown RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 ZNF12P17014 697 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 SSTR4P31391 388 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 EEF1A1P68104 462 aaKnown RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 SPIN3Q5JUX0 258 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 TM9SF4Q92544 642 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 ENAMQ9NRM1 1142 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 MCTS1Q9ULC4 181 aaKnown RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 TBC1D24Q9ULP9 559 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 ICKQ9UPZ9 632 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 CLCA1A8K7I4 914 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 ZNF264O43296 627 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 GALR3O60755 368 aaPredicted RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 SLC35E2P0CK97 266 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 OR13C3Q8NGS6 347 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 DUSP19Q8WTR2 217 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 C17orf50Q8WW18 174 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 ZFPM2Q8WW38 1151 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 ZNF583Q96ND8 569 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 CITED4Q96RK1 184 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 NXT1Q9UKK6 140 aaKnown RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 FARSAQ9Y285 508 aaKnown RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 A0A1B0GX78 115 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms