RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 RSRP1Q9BUV0 290 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 TLNRD1Q9H1K6 362 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 TMEM231Q9H6L2 316 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 CTPS2Q9NRF8 586 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 WWOXQ9NZC7 414 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 GPN3Q9UHW5 284 aaPredicted RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 ENTPD4Q9Y227 616 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 ATG2BQ96BY7 2078 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 SLC9B1P1A6NJY1 282 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 GRXCR1A8MXD5 290 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 CLN5O75503 358 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 FBP1P09467 338 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 TYMPP19971 482 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 PAICSP22234 425 aaKnown RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 NOS3P29474 1203 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 SLC6A4P31645 630 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 SKP2Q13309 424 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 KLF9Q13886 244 aaPredicted RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 MAJINQ3KP22 176 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 B3GNTL1Q67FW5 361 aaPredicted RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 TXNDC8Q6A555 127 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 LINGO4Q6UY18 593 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 HMGN2P46Q86SG4 172 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 NUDT13Q86X67 352 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 KLBQ86Z14 1044 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 CLDN19Q8N6F1 224 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 RTL3Q8N8U3 475 aaKnown RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 OR4D11Q8NGI4 311 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 OR6K2Q8NGY2 324 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 KCTD12Q96CX2 325 aaKnown RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 ZNF75AQ96N20 296 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 GSDMCQ9BYG8 508 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 ASB4Q9Y574 426 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 DOCK4Q8N1I0 1966 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 SLC38A8A6NNN8 435 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 CDC123O75794 336 aaPredicted RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 PPP3CBP16298 524 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 AMD1P17707 334 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 PRKAR1BP31321 381 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 MC4RP32245 332 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 CSF2RBP32927 897 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 PCGF2P35227 344 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 EPHA4P54764 986 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 PSMA6P60900 246 aaKnown RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 WDR5P61964 334 aaKnown RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 ECH1Q13011 328 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 AVPI1Q5T686 147 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 MON1AQ86VX9 555 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 LRRC28Q86X40 367 aaPredicted RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 OR4K1Q8NGD4 311 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 IGSF21Q96ID5 467 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 ARL5BQ96KC2 179 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 TRMT61BQ9BVS5 477 aaKnown RBP8.2□□□□□ -1.1
VAPB-201ENST00000265619 FBXO44Q9H4M3 255 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 SEMA3GQ9NS98 782 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 PRSS21Q9Y6M0 314 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 TRBC2A0A5B9 178 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 CCL16O15467 120 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 OR10H3O60404 316 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 HIST1H2ABP04908 130 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 NPR2P20594 1047 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 HMGA2P52926 109 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 NUBP1P53384 320 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 PDZK1IP1Q13113 114 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 SNTB2Q13425 540 aaKnown RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 RPE65Q16518 533 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 ZNF385BQ569K4 471 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 RAB41Q5JT25 222 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 HIST3H2AQ7L7L0 130 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 NAA40Q86UY6 237 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 SYT12Q8IV01 421 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 ARL14EPQ8N8R7 260 aaPredicted RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 OR56B4Q8NH76 319 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 TRMT10AQ8TBZ6 339 aaKnown RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 HIST1H2ACQ93077 130 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 RAD51AP1Q96B01 352 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 LRIG1Q96JA1 1093 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 ZNF649Q9BS31 505 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 FUZQ9BT04 418 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 NLE1Q9NVX2 485 aaPredicted RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 NDOR1Q9UHB4 597 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 RCE1Q9Y256 329 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 PTPRDP23468 1912 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 A0A0G2JK05 382 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 A0A1W2PPK0 400 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 LILRB3O75022 631 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 ZNF44P15621 663 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 S100PP25815 95 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 MPGP29372 298 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 CTNNB1P35222 781 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 POU3F4P49335 361 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 PPT1P50897 306 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 RENBPP51606 427 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 RIDAP52758 137 aaKnown RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 DCDP81605 110 aaKnown RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 SEMG2Q02383 582 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 TAP2Q03519 686 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 ILKQ13418 452 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms