RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PIP5K1CO60331 668 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 ACTL6BO94805 426 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 GAAP10253 952 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 GJA5P36382 358 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 FGL2Q14314 439 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 IL20RBQ6UXL0 311 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 UNC5DQ6UXZ4 953 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 SFXN5Q8TD22 340 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 ARL5BQ96KC2 179 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 SFXN1Q9H9B4 322 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 COL2A1P02458 1487 aaPredicted RBP16.96■□□□□ 0.31
COL5A3-201ENST00000264828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.96■□□□□ 0.31
COL5A3-201ENST00000264828 GNB3P16520 340 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 GK3PQ14409 553 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 AAK1Q2M2I8 961 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 SLC39A5Q6ZMH5 540 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 KDM1BQ8NB78 822 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 C4orf36Q96KX1 117 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 BMFQ96LC9 184 aa16.96■□□□□ 0.31
COL5A3-201ENST00000264828 HSBP1L1C9JCN9 74 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 SCGB2A1O75556 95 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 CNMDO75829 334 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 HTD2P86397 168 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 MBTPS1Q14703 1052 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 RTP2Q5QGT7 225 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 BORAQ6PGQ7 559 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 SPTSSAQ969W0 71 aa16.96■□□□□ 0.3
COL5A3-201ENST00000264828 MEIS3P2A8K0S8 358 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 RIPPLY1Q0D2K3 151 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 MAMDC4Q6UXC1 1216 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 B3GNT8Q7Z7M8 397 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 CD163Q86VB7 1156 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 BEST4Q8NFU0 473 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 CDS1Q92903 461 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 BORCS7Q96B45 105 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 VDAC3Q9Y277 283 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 SLC6A5Q9Y345 797 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 POM121CA8CG34 1229 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 SYPP08247 313 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 CD79AP11912 226 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 ACPPP15309 386 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 ARSBP15848 533 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 PRDX3P30048 256 aaKnown RBP16.95■□□□□ 0.3
COL5A3-201ENST00000264828 CD79BP40259 229 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 VIPR2P41587 438 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 PRPS1P60891 318 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 BBS1Q8NFJ9 593 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 PELI2Q9HAT8 420 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 CEPT1Q9Y6K0 416 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 TRAV27A0A087WT01 109 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 ONECUT3O60422 494 aaPredicted RBP16.95■□□□□ 0.3
COL5A3-201ENST00000264828 SORT1Q99523 831 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 PINK1Q9BXM7 581 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 ZNF705GA8MUZ8 300 aaPredicted RBP16.95■□□□□ 0.3
COL5A3-201ENST00000264828 SGK494L7N484 410 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 DVL2O14641 736 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 IVDP26440 423 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 GIFP27352 417 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 ACSM3Q53FZ2 586 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 CYS1Q717R9 158 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 HAS2Q92819 552 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 SERINC2Q96SA4 455 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 FUT1P19526 365 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 TMEM25Q86YD3 366 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 OR51Q1Q8NH59 317 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 TMEM239Q8WW34 195 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 ALOXE3Q9BYJ1 711 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 DMRT3Q9NQL9 472 aa16.95■□□□□ 0.3
COL5A3-201ENST00000264828 MYH13Q9UKX3 1938 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 GPX3P22352 226 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 WNT7BP56706 349 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 CYCSP99999 105 aaKnown RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 NADSYN1Q6IA69 706 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 MYLIPQ8WY64 445 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 BCL7BQ9BQE9 202 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 ASB4Q9Y574 426 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 SNRNP70P08621 437 aaKnown RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 CHRNB1P11230 501 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 SCGB2A2Q13296 93 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 CMTM1Q8IZ96 169 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 DCAF13Q9NV06 445 aaKnown RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 VAPAQ9P0L0 249 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 MYH8P13535 1937 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 CX3CR1P49238 355 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 DUSP3P51452 185 aaPredicted RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 ADARB1P78563 741 aaKnown RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 OR7A5Q15622 319 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 CMPK2Q5EBM0 449 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 DCP2Q8IU60 420 aaKnown RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 TTC9BQ8N6N2 239 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 SNAPC3Q92966 411 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 ZNF300Q96RE9 604 aaPredicted RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 TPSD1Q9BZJ3 242 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 SDR39U1Q9NRG7 319 aaPredicted RBP16.94■□□□□ 0.3
COL5A3-201ENST00000264828 MEIOCA2RUB1 952 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 OPN1LWP04000 364 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 T-ENOLP0DO92 83 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 FOSL1P15407 271 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 HLA-DMAP28067 261 aa16.94■□□□□ 0.3
COL5A3-201ENST00000264828 CDK3Q00526 305 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms