RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ZIC1Q15915 447 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 NRMQ8IXM6 262 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 SAP130Q9H0E3 1048 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 CPNE7Q9UBL6 633 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 TNFRSF10DQ9UBN6 386 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 PRODHO43272 600 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 PIPP12273 146 aaPredicted RBP15.23■□□□□ 0.03
CTCF-201ENST00000264010 CPMP14384 443 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 ACSL1P33121 698 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 SEC23BQ15437 767 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 MEX3DQ86XN8 651 aaKnown RBP15.23■□□□□ 0.03
CTCF-201ENST00000264010 CDRT4Q8N9R6 151 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 GATAD2BQ8WXI9 593 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 SLC38A3Q99624 504 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 HCN3Q9P1Z3 774 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 FTSJ1Q9UET6 329 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 TMEM5Q9Y2B1 443 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 MED31Q9Y3C7 131 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 PCDHGB6Q9Y5F9 930 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 KNL1Q8NG31 2342 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 AGAP5A6NIR3 686 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 AKAP8O43823 692 aaKnown RBP15.23■□□□□ 0.03
CTCF-201ENST00000264010 NDUFV2P19404 249 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 HOXC5Q00444 222 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 TSPAN31Q12999 210 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 TMEM31Q5JXX7 168 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 BICRALQ6AI39 1079 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 ZCCHC12Q6PEW1 402 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 UCN3Q969E3 161 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 TP53INP1Q96A56 240 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 AHCYL2Q96HN2 611 aaKnown RBP15.23■□□□□ 0.03
CTCF-201ENST00000264010 TBC1D17Q9HA65 648 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 PCDHB16Q9NRJ7 776 aa15.23■□□□□ 0.03
CTCF-201ENST00000264010 KIR2DS5A0A0G2JLQ3 304 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 A0A0G2JNG1 304 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 A0A0J9YY10 115 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 IQCMA0A1B0GVH7 501 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 KIR2DS3K7RE56 304 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ARHGAP33O14559 1287 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 KIR2DS5Q14953 304 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 PAQR7Q86WK9 346 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 KIF18BQ86Y91 864 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ANKK1Q8NFD2 765 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 TSTD1Q8NFU3 115 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 OR4C6Q8NH72 309 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 FBXO8Q9NRD0 319 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 POT1Q9NUX5 634 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 GPR52Q9Y2T5 361 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 SLC35F4A4IF30 521 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 H0YGG7 62 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 K7EQS6 105 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 OR5F1O95221 314 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 PDGFAP04085 211 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 IGFBP1P08833 259 aaPredicted RBP15.22■□□□□ 0.03
CTCF-201ENST00000264010 PVRP15151 417 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ERP29P30040 261 aaKnown RBP15.22■□□□□ 0.03
CTCF-201ENST00000264010 PRKAR1BP31321 381 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 SOX3P41225 446 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 KIR2DL1P43626 348 aaPredicted RBP15.22■□□□□ 0.03
CTCF-201ENST00000264010 CRYBA2P53672 197 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ARF3P61204 181 aaPredicted RBP15.22■□□□□ 0.03
CTCF-201ENST00000264010 MAP4K2Q12851 820 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 COL9A2Q14055 689 aaPredicted RBP15.22■□□□□ 0.03
CTCF-201ENST00000264010 GPR18Q14330 331 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 SSX6Q7RTT6 188 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 AVL9Q8NBF6 648 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ZNF671Q8TAW3 534 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 KCND3Q9UK17 655 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 FBXL21Q9UKT6 434 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 MEIOCA2RUB1 952 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 TRAPPC13A5PLN9 417 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 PTNP21246 168 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ENTPD8Q5MY95 495 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 C14orf105Q9NVL8 296 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ZNF443Q9Y2A4 671 aaPredicted RBP15.22■□□□□ 0.03
CTCF-201ENST00000264010 A3GALT2U3KPV4 340 aa15.22■□□□□ 0.03
CTCF-201ENST00000264010 ATG2BQ96BY7 2078 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 SGCEO43556 437 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 THEGLP0DJG4 465 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 GNSP15586 552 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 BMP8BP34820 402 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 RPL4P36578 427 aaKnown RBP15.21■□□□□ 0.03
CTCF-201ENST00000264010 GCGRP47871 477 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 CCR4P51679 360 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 ARHGDIBP52566 201 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 OCLNQ16625 522 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 MFSD12Q6NUT3 480 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 BMP8AQ7Z5Y6 402 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 ZER1Q7Z7L7 766 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 CCL4L1Q8NHW4 92 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 TMEM163Q8TC26 289 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 GPR174Q9BXC1 333 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 ANKRA2Q9H9E1 313 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 METTL15A6NJ78 407 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 UBXN7O94888 489 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 SOX30O94993 753 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 PRG2P13727 222 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 TPMTP51580 245 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 HSD17B12Q53GQ0 312 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 FIGNL1Q6PIW4 674 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms