RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 CHRNA10Q9GZZ6 450 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 TMEM27Q9HBJ8 222 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 FGF20Q9NP95 211 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 ETAA1Q9NY74 926 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 KNL1Q8NG31 2342 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 IGHV5-51A0A0C4DH38 117 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SURF4O15260 269 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 PRAMEF2O60811 474 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SDC3O75056 442 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ENDOUP21128 410 aaKnown RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SSTR4P31391 388 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SOX6P35712 828 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SOX3P41225 446 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 RNF144AP50876 292 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 HSD17B7P56937 341 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 MLLT11Q13015 90 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF267Q14586 743 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SOWAHCQ53LP3 525 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 PDZK1Q5T2W1 519 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF613Q6PF04 617 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ZC3H14Q6PJT7 736 aaKnown RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 GDPGP1Q6ZNW5 385 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ZAR1Q86SH2 424 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SPEM1Q8N4L4 309 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF614Q8N883 585 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ABTB1Q969K4 478 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 CD180Q99467 661 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 RAB33BQ9H082 229 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 RNF167Q9H6Y7 350 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 SEC14L4Q9UDX3 406 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF223Q9UK11 482 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 TMEM5Q9Y2B1 443 aa11.98□□□□□ -0.49
SPTLC1-201ENST00000262554 CDC42EP2O14613 210 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF749O43361 778 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CH25HO95992 272 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 HBQ1P09105 142 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 IFI30P13284 250 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 PSMA1P25786 263 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 ETV5P41161 510 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 FNTBP49356 437 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 ETV1P50549 477 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 RPS3AP61247 264 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 BTG2P78543 158 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 PRKCDQ05655 676 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 SRSF5Q13243 272 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 DOC2BQ14184 412 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 ERV3-1Q14264 604 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 GRM7Q14831 915 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 WDR88Q6ZMY6 472 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 BTLAQ7Z6A9 289 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 GRAMD2AQ8IUY3 354 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 SIX5Q8N196 739 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 OR52L1Q8NGH7 329 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 OR51Q1Q8NH59 317 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 FANK1Q8TC84 345 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 BRIX1Q8TDN6 353 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 AHCYL2Q96HN2 611 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 COX4I2Q96KJ9 171 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 SAMD8Q96LT4 415 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 VSTM2LQ96N03 204 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 PELOQ9BRX2 385 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CNPPD1Q9BV87 410 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 DPH1Q9BZG8 443 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 NXF2Q9GZY0 626 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 Q9N2J8 555 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 NDUFB11Q9NX14 153 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 GALNT8Q9NY28 637 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CFL2Q9Y281 166 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 EXOSC1Q9Y3B2 195 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CACNA1IQ9P0X4 2223 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 FITM1A5D6W6 292 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 H0YIG0 161 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 DSCR3O14972 297 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 SNPHO15079 494 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 MAGEB3O15480 346 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 GPX5O75715 221 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 SULT1C4O75897 302 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 LYPD3O95274 346 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 PTNP21246 168 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 MAOAP21397 527 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 GCGRP47871 477 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CSNK1EP49674 416 aaKnown RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 PGDP52209 483 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 GAS1P54826 345 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CDH11P55287 796 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 WNT4P56705 351 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 ZSWIM7Q19AV6 140 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 AMZ1Q400G9 498 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 NKAIN2Q5VXU1 208 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 RPL13AP3Q6NVV1 102 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 PAQR6Q6TCH4 344 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 DCDC5Q6ZRR9 648 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 METTL27Q8N6F8 245 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 OR4N2Q8NGD1 307 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 C1orf216Q8TAB5 229 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CHPT1Q8WUD6 406 aa11.97□□□□□ -0.49
SPTLC1-201ENST00000262554 CNOT9Q92600 299 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms