RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 EIF1P41567 113 aaKnown RBP10.99□□□□□ -0.65
TRAF4-202ENST00000262396 PCYT1AP49585 367 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 CARD18P57730 90 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 RAC1P63000 192 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 TP53BP2Q13625 1128 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 CAPRIN1Q14444 709 aaKnown RBP10.99□□□□□ -0.65
TRAF4-202ENST00000262396 ZCCHC12Q6PEW1 402 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 LRIG3Q6UXM1 1119 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 TMCO5AQ8N6Q1 288 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 OR4C3Q8NH37 302 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 RFWD2Q8NHY2 731 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 PPP1R14CQ8TAE6 165 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.99□□□□□ -0.651e-8■■□□□ 14.3
TRAF4-202ENST00000262396 AGR3Q8TD06 166 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 ADAMTS15Q8TE58 950 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 EPS8L3Q8TE67 593 aaKnown RBP10.99□□□□□ -0.65
TRAF4-202ENST00000262396 OSTF1Q92882 214 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 PPP3R2Q96LZ3 170 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 RTN4RQ9BZR6 473 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 C12orf65Q9H3J6 166 aaKnown RBP10.99□□□□□ -0.65
TRAF4-202ENST00000262396 ACSS1Q9NUB1 689 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-202ENST00000262396 MED17Q9NVC6 651 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 GIN1Q9NXP7 522 aa10.99□□□□□ -0.65
TRAF4-202ENST00000262396 IGLV3-32A0A0A0MS00 114 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 A0A1W2PPR1 153 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 DEFB108AA8MXU0 73 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 ACP2P11117 423 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 PRPH2P23942 346 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 SLC7A1P30825 629 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 SOAT1P35610 550 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 SLC6A8P48029 635 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 CCR4P51679 360 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 LASP1Q14847 261 aaKnown RBP10.98□□□□□ -0.65
TRAF4-202ENST00000262396 DUSP5Q16690 384 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRAF4-202ENST00000262396 LSM12Q3MHD2 195 aaKnown RBP10.98□□□□□ -0.65
TRAF4-202ENST00000262396 ATP6AP1LQ52LC2 224 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 CCNJQ5T5M9 372 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 MFSD12Q6NUT3 480 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 APOOLQ6UXV4 268 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 LILRA2Q8N149 483 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 GTPBP8Q8N3Z3 284 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-202ENST00000262396 SLC16A11Q8NCK7 471 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 LRRN4CLQ8ND94 238 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 ACTRT2Q8TDY3 377 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 MZB1Q8WU39 189 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 TWIST2Q8WVJ9 160 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 MTERF3Q96E29 417 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 C16orf58Q96GQ5 468 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 KLHL15Q96M94 604 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 GATA5Q9BWX5 397 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-202ENST00000262396 BTBD2Q9BX70 525 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 ACTR6Q9GZN1 396 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 HOXD1Q9GZZ0 328 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 NGBQ9NPG2 151 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 PLSCR4Q9NRQ2 329 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 TRAF6Q9Y4K3 522 aa10.98□□□□□ -0.65
TRAF4-202ENST00000262396 MAP1AP78559 2803 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-202ENST00000262396 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-202ENST00000262396 B4DXG7 233 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 SS18L1O75177 396 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-202ENST00000262396 PEX11AO75192 247 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 CYP7B1O75881 506 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 CGAP01215 116 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 HEXAP06865 529 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 NGFRP08138 427 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 BCKDHAP12694 445 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 PCSK6P29122 969 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 KIAA0040Q15053 153 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 RFTN2Q52LD8 501 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-202ENST00000262396 ZNF385BQ569K4 471 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 BHLHB9Q6PI77 547 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 ZNF704Q6ZNC4 412 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-202ENST00000262396 GGNQ86UU5 652 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 CXorf67Q86X51 503 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-202ENST00000262396 TDRPQ86YL5 185 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 NATD1Q8N6N6 113 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 FNDC5Q8NAU1 212 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 STEAP2Q8NFT2 490 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 OR56A1Q8NGH5 318 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 ROBO4Q8WZ75 1007 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 CDS1Q92903 461 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 GTPBP3Q969Y2 492 aaKnown RBP10.97□□□□□ -0.65
TRAF4-202ENST00000262396 PLPPR2Q96GM1 343 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 TNFRSF12AQ9NP84 129 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 GPR52Q9Y2T5 361 aa10.97□□□□□ -0.65
TRAF4-202ENST00000262396 NF1P21359 2839 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 PIP5K1BO14986 540 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 LSM1O15116 133 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 CLOCKO15516 846 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 TBX19O60806 448 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 SOX30O94993 753 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 SLU7O95391 586 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 LY6G6DO95868 133 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 HMGN2P05204 90 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 FESP07332 822 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 CCT3P49368 545 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 ATP5J2P56134 94 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 PCLAFQ15004 111 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms