RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 RASD1Q9Y272 281 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 A0A0A6YYD5 115 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 IRGMA1A4Y4 181 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 CHST10O43529 356 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 SAGP10523 405 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 RRAS2P62070 204 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ABATP80404 500 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 MLF2Q15773 248 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 PGGHGQ32M88 737 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 CEP78Q5JTW2 689 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 KIAA1211LQ6NV74 962 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ACBD7Q8N6N7 88 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 OR4E2Q8NGC2 313 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 PCBD2Q9H0N5 130 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 MED28Q9H204 178 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 PPIL3Q9H2H8 161 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 WASH6PQ9NQA3 447 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ACOXLQ9NUZ1 547 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ADAM30Q9UKF2 790 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 WDR45Q9Y484 360 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 A0A0B4J203 849 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 GNB5O14775 395 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 SURF4O15260 269 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 FABP7O15540 132 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 PRG2P13727 222 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 BMP7P18075 431 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 TBXA2RP21731 343 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ATP5A1P25705 553 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 UQCRC1P31930 480 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 OMPP47874 163 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 SIM1P81133 766 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 CD300LDQ6UXZ3 194 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 TMEM91Q6ZNR0 172 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 GDF7Q7Z4P5 450 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ELMOD2Q8IZ81 293 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 OR4M1Q8NGD0 313 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 OR6C4Q8NGE1 309 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 OR51L1Q8NGJ5 315 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ACOT11Q8WXI4 607 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 MS4A6EQ96DS6 147 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 THAP7Q9BT49 309 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ALG8Q9BVK2 526 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 OBSL1O75147 1896 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 MID1O15344 667 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 EMC8O43402 210 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 CLEC3AO75596 197 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 CD3GP09693 182 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 NDUFV2P19404 249 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 NOS3P29474 1203 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 FGF9P31371 208 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 AGFG1P52594 562 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 CAMK2BQ13554 666 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 GPR176Q14439 515 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 FCN2Q15485 313 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ZNF322Q6U7Q0 402 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 NR2C2APQ86WQ0 139 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 FRMD1Q8N878 549 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ZFAND1Q8TCF1 268 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 DIO2Q92813 273 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 ELP4Q96EB1 424 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC35A4Q96G79 324 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 HCAR1Q9BXC0 346 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 UBQLN3Q9H347 655 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 UBE2ZQ9H832 354 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 PCDHGB7Q9Y5F8 929 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 PIAS3Q9Y6X2 628 aa13.49□□□□□ -0.25
SFSWAP-201ENST00000261674 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 CENPVL1A0A0U1RR11 272 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 E9PI62 339 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 CLUP10909 449 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 HLA-DMAP28067 261 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 FRKP42685 505 aaPredicted RBP13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 RAB28P51157 221 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 EFNB1P98172 346 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 ZSWIM7Q19AV6 140 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 ITPRIPL2Q3MIP1 535 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 AADACL4Q5VUY2 407 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 ABHD17CQ6PCB6 329 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 ESPNLQ6ZVH7 1005 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 CEACAM19Q7Z692 300 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 FAM181AQ8N9Y4 354 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 OR56A1Q8NGH5 318 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 OR13C5Q8NGS8 318 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 IFT27Q9BW83 186 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 WDR26Q9H7D7 661 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 CBLCQ9ULV8 474 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 CHST2Q9Y4C5 530 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 CXorf51AA0A1B0GTR3 108 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 A0A1W2PRG6 482 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 TNFRSF10AO00220 468 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 CASC3O15234 703 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 SERPINI2O75830 405 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 EGFP01133 1207 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 ARPC4P59998 168 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 DPTQ07507 201 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 ARHGAP19Q14CB8 494 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 SF3A2Q15428 464 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms