RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 UBALD2Q8IYN6 164 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NABP1Q96AH0 204 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 AASDHPPTQ9NRN7 309 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 EHD3Q9NZN3 535 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 PCDHGA10Q9Y5H3 936 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 HEBP2Q9Y5Z4 205 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 IGLV3-32A0A0A0MS00 114 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 A0A1B0GTH9 108 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 TTLL8A6PVC2 850 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 A8MVJ9 347 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CLIC1O00299 241 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 PNPP00491 289 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 EPXP11678 715 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 AQP1P29972 269 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 ELP6Q0PNE2 266 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 ISXQ2M1V0 245 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SDR16C5Q8N3Y7 309 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 WDR70Q9NW82 654 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NLGN3Q9NZ94 848 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 C15orf41Q9Y2V0 281 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NDUFS4O43181 175 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 ALPPP05187 535 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 RPSAP08865 295 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 GKN3PP0CG01 181 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CCKARP32238 428 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 HSD17B2P37059 387 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 DEFA1P59665 94 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 DEFA3P59666 94 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SELENOWP63302 87 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 ATAD3BQ5T9A4 648 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 LSMEM1Q8N8F7 131 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 MED8Q96G25 268 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 EGLN3Q9H6Z9 239 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SEC61A2Q9H9S3 476 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC35C2Q9NQQ7 365 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 THSD1Q9NS62 852 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 CSNK1G3Q9Y6M4 447 aa5.1□□□□□ -1.59
TOPBP1-201ENST00000260810 NR5A2O00482 541 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 THBS1P07996 1170 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PNLIPP16233 465 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 EPB42P16452 691 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 ADSLP30566 484 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PTGS2P35354 604 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 LIPAP38571 399 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC6A8P48029 635 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 HCCSP53701 268 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PMS2P3Q13401 168 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 CYLC2Q14093 348 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SQLEQ14534 574 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SWT1Q5T5J6 900 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 BPHLQ86WA6 291 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SIRT6Q8N6T7 355 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 ARL10Q8N8L6 244 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 FNDC5Q8NAU1 212 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 MDS2Q8NDY4 140 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 REXO5Q96IC2 774 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 RBM4Q9BWF3 364 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 RAB11FIP5Q9BXF6 653 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 ITPAQ9BY32 194 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 RMI1Q9H9A7 625 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 NOP53Q9NZM5 478 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 ACSL5Q9ULC5 683 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PCDHGB3Q9Y5G1 929 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 A0A0J9YVX5 310 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PRKYO43930 277 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SNAPC5O75971 98 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 KRT6AP02538 564 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 KRT6BP04259 564 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 NTRK1P04629 796 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 HTR1BP28222 390 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 NDUFS1P28331 727 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC7A1P30825 629 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 TLX1P31314 330 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 MPLP40238 635 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 KRT6CP48668 564 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SHC2P98077 582 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PRR30Q53SZ7 412 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 TJAP1Q5JTD0 557 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 ADGRG3Q86Y34 549 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SNX29P2Q8IUI4 249 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SAMD14Q8IZD0 417 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 JADE3Q92613 823 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 NKD1Q969G9 470 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 FAIM2Q9BWQ8 316 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 RACGAP1Q9H0H5 632 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 NMNAT1Q9HAN9 279 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PCDHGB1Q9Y5G3 927 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SAC3D1A6NKF1 404 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 TRIM3O75382 744 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 ULK1O75385 1050 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 PCDH8O95206 1070 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 OTCP00480 354 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 HPCAL1P37235 193 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF117Q03924 483 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC9A5Q14940 896 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 INTS11Q5TA45 600 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 C16orf62Q7Z3J2 963 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 C6orf120Q7Z4R8 191 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC30A8Q8IWU4 369 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms