RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 RCBTB1Q8NDN9 531 aa25.59■■□□□ 1.69
CCM2-201ENST00000258781 OR4N2Q8NGD1 307 aa25.59■■□□□ 1.69
CCM2-201ENST00000258781 FCGR1BQ92637 280 aa25.59■■□□□ 1.69
CCM2-201ENST00000258781 Q96MT0 163 aa25.59■■□□□ 1.69
CCM2-201ENST00000258781 NAA50Q9GZZ1 169 aaKnown RBP25.59■■□□□ 1.69
CCM2-201ENST00000258781 SYNDIG1Q9H7V2 258 aa25.59■■□□□ 1.69
CCM2-201ENST00000258781 SLC25A19Q9HC21 320 aa25.59■■□□□ 1.69
CCM2-201ENST00000258781 CNOT2Q9NZN8 540 aaKnown RBP25.59■■□□□ 1.69
CCM2-201ENST00000258781 WARS2Q9UGM6 360 aaKnown RBP25.59■■□□□ 1.69
CCM2-201ENST00000258781 SLC7A7Q9UM01 511 aa25.59■■□□□ 1.69
CCM2-201ENST00000258781 FPR3P25089 353 aa25.58■■□□□ 1.69
CCM2-201ENST00000258781 HTR2AP28223 471 aa25.58■■□□□ 1.69
CCM2-201ENST00000258781 NUDT6P53370 316 aa25.58■■□□□ 1.69
CCM2-201ENST00000258781 ZNF141Q15928 474 aa25.58■■□□□ 1.69
CCM2-201ENST00000258781 PRAMEF17Q5VTA0 474 aa25.58■■□□□ 1.69
CCM2-201ENST00000258781 OR8J1Q8NGP2 316 aa25.58■■□□□ 1.69
CCM2-201ENST00000258781 PTPMT1Q8WUK0 201 aaPredicted RBP25.58■■□□□ 1.69
CCM2-201ENST00000258781 LIN28AQ9H9Z2 209 aaKnown RBP25.58■■□□□ 1.69
CCM2-201ENST00000258781 KRCC1Q9NPI7 259 aaPredicted RBP25.58■■□□□ 1.69
CCM2-201ENST00000258781 EP300Q09472 2414 aaPredicted RBP25.58■■□□□ 1.69
CCM2-201ENST00000258781 EFCAB10A6NFE3 127 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 NPIPB9F8W1W9 429 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 RFX3P48380 749 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 CDK5Q00535 292 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 OR1Q1Q15612 314 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 PDZK1Q5T2W1 519 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 KIF18BQ86Y91 864 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 SLC35B4Q969S0 331 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 ZNF559Q9BR84 538 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 ITPAQ9BY32 194 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 ST6GALNAC1Q9NSC7 600 aaPredicted RBP25.57■■□□□ 1.68
CCM2-201ENST00000258781 CBLCQ9ULV8 474 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 SRPK3Q9UPE1 567 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 FLRT2O43155 660 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 DYRK3O43781 588 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 GKN3PP0CG01 181 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 STAT5AP42229 794 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 GIPRP48546 466 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 PLAURQ03405 335 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 GINS1Q14691 196 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 TBCEQ15813 527 aaPredicted RBP25.57■■□□□ 1.68
CCM2-201ENST00000258781 UBE2UQ5VVX9 321 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 CCDC81Q6ZN84 652 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 ATOH1Q92858 354 aaPredicted RBP25.57■■□□□ 1.68
CCM2-201ENST00000258781 FAM46AQ96IP4 442 aaKnown RBP25.57■■□□□ 1.68
CCM2-201ENST00000258781 DPYSL5Q9BPU6 564 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 POLDIP3Q9BY77 421 aaKnown RBP25.57■■□□□ 1.68
CCM2-201ENST00000258781 AMBNQ9NP70 447 aa25.57■■□□□ 1.68
CCM2-201ENST00000258781 KLF4O43474 513 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 ATE1O95260 518 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 SMSP52788 366 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 RHAGQ02094 409 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 ACY1Q03154 408 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 ARHGAP40Q5TG30 622 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 ARHGAP22Q7Z5H3 698 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 TMEM151BQ8IW70 566 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 OR4D9Q8NGE8 314 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 TEX47Q8TBZ9 253 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 RHBDD1Q8TEB9 315 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 TMEM255BQ8WV15 326 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 SENP5Q96HI0 755 aaPredicted RBP25.56■■□□□ 1.68
CCM2-201ENST00000258781 PRSS27Q9BQR3 290 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 FUNDC2Q9BWH2 189 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 PNO1Q9NRX1 252 aaKnown RBP25.56■■□□□ 1.68
CCM2-201ENST00000258781 FAM86C1Q9NVL1 165 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 GPR83Q9NYM4 423 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 OR10H1Q9Y4A9 318 aa25.56■■□□□ 1.68
CCM2-201ENST00000258781 FER1L5A0AVI2 2057 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 LYPD3O95274 346 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 PIPP12273 146 aaPredicted RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 CD59P13987 128 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 DUSP3P51452 185 aaPredicted RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 ROR2Q01974 943 aaKnown RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCM2-201ENST00000258781 MINDY4Q4G0A6 757 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 MFSD4BQ5TF39 518 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 ZNF613Q6PF04 617 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 NRMQ8IXM6 262 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 BCORP1Q8N888 145 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 B3GNT7Q8NFL0 401 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 CNOT9Q92600 299 aaKnown RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 TSLPQ969D9 159 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 IL4I1Q96RQ9 567 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 EDEM2Q9BV94 578 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 GPN2Q9H9Y4 310 aaPredicted RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 CNIH4Q9P003 139 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 BCAS1O75363 584 aaPredicted RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 LDOC1O95751 146 aaPredicted RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 ATP12AP54707 1039 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 FGFBP1Q14512 234 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 ELAVL1Q15717 326 aaKnown RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 OCLNQ16625 522 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 SLC25A30Q5SVS4 291 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 MRGPREQ86SM8 312 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 ANKRD13BQ86YJ7 626 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 CMIPQ8IY22 773 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 RNF113BQ8IZP6 322 aaKnown RBP25.55■■□□□ 1.68
CCM2-201ENST00000258781 STX19Q8N4C7 294 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 SLC46A1Q96NT5 459 aa25.55■■□□□ 1.68
CCM2-201ENST00000258781 BCL7BQ9BQE9 202 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms