RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ENKD1Q9H0I2 346 aa14.18□□□□□ -0.14
DDX56-201ENST00000258772 KCNN2Q9H2S1 579 aa14.18□□□□□ -0.14
DDX56-201ENST00000258772 SLA2Q9H6Q3 261 aa14.18□□□□□ -0.14
DDX56-201ENST00000258772 MED20Q9H944 212 aa14.18□□□□□ -0.14
DDX56-201ENST00000258772 FGF22Q9HCT0 170 aa14.18□□□□□ -0.14
DDX56-201ENST00000258772 SIDT1Q9NXL6 827 aaKnown RBP14.18□□□□□ -0.14
DDX56-201ENST00000258772 GDE1Q9NZC3 331 aa14.18□□□□□ -0.14
DDX56-201ENST00000258772 KLF15Q9UIH9 416 aa14.18□□□□□ -0.14
DDX56-201ENST00000258772 ZNF223Q9UK11 482 aaPredicted RBP14.18□□□□□ -0.14
DDX56-201ENST00000258772 ZC3H12DA2A288 527 aaKnown RBP14.17□□□□□ -0.14
DDX56-201ENST00000258772 TRAPPC13A5PLN9 417 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 OR6C70A6NIJ9 312 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 SGK494L7N484 410 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 EML2O95834 649 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 APODP05090 189 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 THBS1P07996 1170 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 PRG2P13727 222 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 ELK1P19419 428 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 FUT1P19526 365 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 MAT2AP31153 395 aaKnown RBP14.17□□□□□ -0.14
DDX56-201ENST00000258772 MTNR1BP49286 362 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 CLDN20P56880 219 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 SIM1P81133 766 aaPredicted RBP14.17□□□□□ -0.14
DDX56-201ENST00000258772 MAPK14Q16539 360 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 EIPR1Q53HC9 387 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 SMARCD3Q6STE5 483 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 WDR88Q6ZMY6 472 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 RANBP3LQ86VV4 465 aaPredicted RBP14.17□□□□□ -0.14
DDX56-201ENST00000258772 YIPF7Q8N8F6 280 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 NT5CQ8TCD5 201 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 ACOT12Q8WYK0 555 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 SCARF2Q96GP6 870 aaPredicted RBP14.17□□□□□ -0.14
DDX56-201ENST00000258772 CD180Q99467 661 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 MARVELD1Q9BSK0 173 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 FN3KQ9H479 309 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 TBC1D29Q9UFV1 150 aa14.17□□□□□ -0.14
DDX56-201ENST00000258772 BHLHE40O14503 412 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 DNAJB6O75190 326 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 TRIM3O75382 744 aaPredicted RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 GKN3PP0CG01 181 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 MAKP20794 623 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 HTR2AP28223 471 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 ADAM15Q13444 863 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 RUNX2Q13950 521 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 TRMT12Q53H54 448 aaKnown RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 IDNKQ5T6J7 187 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 RNF113BQ8IZP6 322 aaKnown RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 TMEM99Q8N816 258 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 PFN4Q8NHR9 129 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 UPRTQ96BW1 309 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 TBX5Q99593 518 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 HCAR1Q9BXC0 346 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 PLA2G2FQ9BZM2 168 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 ATP13A2Q9NQ11 1180 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 PHF11Q9UIL8 331 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 SLC35G6P0C7Q6 338 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 SMIM10L1P0DMW3 83 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 BMP7P18075 431 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 INPP1P49441 399 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 CSTF1Q05048 431 aaKnown RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 SUZ12Q15022 739 aaKnown RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 TCEA2Q15560 299 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 DEFB134Q4QY38 66 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 ZNF776Q68DI1 518 aaPredicted RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 TIGD3Q6B0B8 471 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 THOC7Q6I9Y2 204 aaKnown RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 USP53Q70EK8 1073 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 LIX1LQ8IVB5 337 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 LNX2Q8N448 690 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 OR52L1Q8NGH7 329 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 FANK1Q8TC84 345 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 SMIM10Q96HG1 83 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 HS6ST2Q96MM7 605 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 UBL7Q96S82 380 aaPredicted RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 ZNF350Q9GZX5 532 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 MKRN2Q9H000 416 aaKnown RBP14.16□□□□□ -0.14
DDX56-201ENST00000258772 PIGUQ9H490 435 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 C20orf141Q9NUB4 165 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 EXTL2Q9UBQ6 330 aa14.16□□□□□ -0.14
DDX56-201ENST00000258772 LOC102723532A0A0G2JNH3 316 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 DAPL1A0PJW8 107 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 SLC31A1O15431 190 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 HRO43593 1189 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 PLRG1O43660 514 aaKnown RBP14.15□□□□□ -0.14
DDX56-201ENST00000258772 SLC43A1O75387 559 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 CHRNB1P11230 501 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 IFI30P13284 250 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 CPMP14384 443 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 TBXA2RP21731 343 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 ERP29P30040 261 aaKnown RBP14.15□□□□□ -0.14
DDX56-201ENST00000258772 FAPQ12884 760 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 EFR3AQ14156 821 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 OR1Q1Q15612 314 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 PRPF38BQ5VTL8 546 aaKnown RBP14.15□□□□□ -0.14
DDX56-201ENST00000258772 HBMQ6B0K9 141 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 NUDT18Q6ZVK8 323 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 ZCCHC10Q8TBK6 192 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 DOK4Q8TEW6 326 aa14.15□□□□□ -0.14
DDX56-201ENST00000258772 TMEM239Q8WW34 195 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms